LOCUS AK099797 3650 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013097I18, full insert sequence. ACCESSION AK099797 VERSION AK099797.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 3650) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..3650 /clone="J013097I18" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 2374..3021 /db_xref="Osa1:LOC_Os12g38180" /db_xref="RAP-DB:Os12g0569700" /note="(RAP Annotation release2) Similar to Non-cell-autonomous heat shock cognate protein 70" /note="(Rice Genome Annotation Project) heat shock cognate 70 kDa protein 2, putative, expressed" /note="mapping to R12-TIGRv4S1-000684F (Chr.12: short arm=23408630, long arm=23413654, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG94299.1" /translation="MSCVSSMSLLLLPLPMVLTRRLPVLVRRTSSSSTLVVVPLMSLF SPLRREVKATAGDTHLGGEDFDNRMVKHFVQEFKRKSKKDITGNPRPVGRLRTACEWA KRTLSPPLPRPPTIEIDSLYEGIDFYSNITCARFEELTMDLFRKCMRGYQDGQRAACT MFILVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAPILVWRRPEE" BASE COUNT 892 a 783 c 818 g 1157 t ORIGIN 1 gactcaagtc ctcccatcca gcagctcagc cgccacaagc catggccgat gcgagctcgg 61 ccgccgtcgc tgcccccaag ccccaactgg ccgccggcac ttgagcacca agcagggcca 121 gctcgacgac gccgtcgccg cccgccacca agctcgaaca gatcagctcc agcaatgttc 181 aatccaacga cttttgcatt gattgattga ttttctctgc tcgtgtgatt gtgtgattgg 241 aatcgactag cttgaaccaa ttgatagtat ccctgtgctg tgcgtgcatt gcatgtgtac 301 atattaccaa atctctgttg catatggatc cactcttgga tatcggtttt cgcttgaatg 361 ccgttttctt ctgttatttt gttgttcctt tttttaagct ataaaaccca accttctctt 421 tatgatctgt ttgttttcaa tattgtaatt ttttttctgg aatttgttgt taattataac 481 cttttcatta tctcctgagc tagcagattg atgatgaaac aatttctcca agcgtttgtt 541 acgctgacat ccatatatga tggagggcta tgttaccata gccttcatag ttttcaatct 601 gaaccatctg ctgctcaatc attttcccca ggtttttttt acagcgattg tttctccatt 661 gctaactgtt ctgtattgat ttgggattca aattcctttc atggtttttg ctcgttttct 721 ttacaatctc attcatttgt ctgtgcaaca tttgggaaaa attgggagaa gtgatgatat 781 tatatccata ccacatttct gcattcacta tgatgatcat taacttcatg cactaccatc 841 tgatctccca ctacacataa taaagttatg gtacaaggta tataaattga agttgtgcaa 901 tgatggactg attttcattt acacgctgaa tttattttgt taattaatgt gcaatctgtg 961 atgcaaataa tcccatttgc tgaatcactg tgattattgc aatcaaaatc accatctttc 1021 ggctgagatt gcacattgtt attctgcaaa atttatcttt gttttaaatt aaggtttatg 1081 ccatttggta tctgacacat aatcatttct ctgattatgt gtctcgaaac atggcagaaa 1141 gtgaggggga acggtccttg cgacactggt tgctactata tgagcttcta gttactatat 1201 acccgtttac atttccttgc ttttttagta tttctgttta acttttgtca tgcctatgtg 1261 ttgtgatgca ttagttttgt actgtggaga ttgtacccct gtcaaaccac ttaatgaaat 1321 tacagataat tattagactg aaaatgccgt cttttggctg aatcactctg atcaatcaaa 1381 atcaccatat ttcagctgag attgcacatt gttgttacgc gaaacaattt tatctttgtt 1441 ttaaattaag gttcagccat ttggtatctg acacataatc atttctctga ttacatgtct 1501 cgaaacatgg cagaaagtaa gggggaacgg tccttgcgat gctggttgct gctatatgag 1561 cttctagtta ctatataccc gtttacatat cctttgcttt cttagtattt ctgtttggct 1621 ttattcatta gttatgccta tgtgttgtaa tgcattagtt ttgtactgtg gagattgtat 1681 gtctatcaaa ctacttaatg aagttacaga taaatattag actgaaagtc taaaatcact 1741 gtagcatatt gggctaaaag gtatagtttg tttacttgga atctctcgaa agtttgtttg 1801 attgctgaat ttgtgctcca gtttgtttgc tgtttcttac atgaagcatt acctgtcctg 1861 atgttattta tcacttatga gatttgtgta tgcagtttcc attttttcag tgcctgttat 1921 gcagatgcca agcgtctcat tggccggaga tttactgatg cttctgtcca gagtgatatt 1981 aagctctggc ccttcaaggt cattgctgga cctggtgaca agtcaacgat tgtggttcag 2041 tacaagggtg aagagaagca ggttgcagct gagatgccaa gcgtctcatc ggccagagat 2101 ttactgatgc ttctgtccag agtgatatta tgctctggcc cttcaaggtc atcgctggac 2161 ctggtgacaa gtcaatgatt gtggtccagt acaagggtga agagaagcag tttgcagctg 2221 aggagatctc ttctatggtc ctcatcaaga tgcgtgagat tgctgaagct taccttggca 2281 ccaccataaa aaaagctgtc gtaacagttc ctgcttactt caactactca cagaggcagg 2341 ctaccaagga cgctagggtc attgctggcc tcaatgtcat gcgtatcatc aatgagccta 2401 ctgctgctgc cattgcctat ggtcttgaca agaaggcttc cagtgttggt gagaagaacg 2461 tcctcatctt cgaccttggt ggtggtacct ttgatgtctc tcttctcacc attgaggagg 2521 gaggtcaagg ccacagctgg tgacacgcat cttggtggtg aggactttga caacagaatg 2581 gtgaagcact ttgttcagga gttcaagagg aagagcaaga aggacatcac tggcaaccca 2641 aggcctgtcg ggaggctgag gacagcttgt gagtgggcga agaggactct ctcccctcca 2701 cttcccagac cacccaccat tgagattgac tccctgtacg agggcatcga cttctactcg 2761 aacatcacct gcgccaggtt cgaggagctg accatggatc tcttcaggaa gtgcatgagg 2821 ggataccaag atggacaaag agcagcgtgc acgatgttca tccttgttgg tggctccacc 2881 aggattccca gagtgcagca gctcctccag gacttcttca atggcaagga gctctgcaag 2941 aacatcaacc ctgatgaggc cgtcgcctat ggcgccgctg tccaggcccc catcttggtc 3001 tggagacggc cagaggagtg atgacctaga aggagcaggc cggtcttctc cacctactcc 3061 gacaaccggc ctggtgtgtt gatccaggtg tacgagggcg atgggagagg accatgacac 3121 cattgagtaa gtgaggagat cgagaagatg gtccaggacg cggagaagta caagtcggag 3181 gacgatgagc tacatcgaag aacatgcaca aacaccatca aggtccgagc acccacgcgg 3241 cggccaagaa gatgggagga cgcggtggga gattgagcca agatggacga ggacgtgccg 3301 ttaaattttg gctgatcatg gtggttaaat tttggctacg ttgtaatgaa aaatgcattg 3361 gttgcttcgt taaagtaata gtactacaat tgttctgttt cggttcatcc gcatttgcct 3421 tttgattttt gtttagctgc tacttaaatc gcgtttattt tgcatacagt atctatctgt 3481 cttctccaaa gcgttggggt gtgcttttct tccccggtgg tattcactat tcagagtctt 3541 ttgtcgtcgt gtctgctcta atatgccatc cattgtaggg agtggattac gtccccccat 3601 cgtgtatctt tttctttcaa aatcaatgca aatagttgtt aaaaattctg //