LOCUS       AK099797                3650 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013097I18, full insert
            sequence.
ACCESSION   AK099797
VERSION     AK099797.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3650
                     /clone="J013097I18"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             2374..3021
                     /db_xref="Osa1:LOC_Os12g38180"
                     /db_xref="RAP-DB:Os12g0569700"
                     /note="(RAP Annotation release2) Similar to
                     Non-cell-autonomous heat shock cognate protein 70"
                     /note="(Rice Genome Annotation Project) heat shock
                     cognate 70 kDa protein 2, putative, expressed"
                     /note="mapping to R12-TIGRv4S1-000684F (Chr.12: short
                     arm=23408630, long arm=23413654, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG94299.1"
                     /translation="MSCVSSMSLLLLPLPMVLTRRLPVLVRRTSSSSTLVVVPLMSLF
                     SPLRREVKATAGDTHLGGEDFDNRMVKHFVQEFKRKSKKDITGNPRPVGRLRTACEWA
                     KRTLSPPLPRPPTIEIDSLYEGIDFYSNITCARFEELTMDLFRKCMRGYQDGQRAACT
                     MFILVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAPILVWRRPEE"
BASE COUNT          892 a          783 c          818 g         1157 t
ORIGIN      
        1 gactcaagtc ctcccatcca gcagctcagc cgccacaagc catggccgat gcgagctcgg
       61 ccgccgtcgc tgcccccaag ccccaactgg ccgccggcac ttgagcacca agcagggcca
      121 gctcgacgac gccgtcgccg cccgccacca agctcgaaca gatcagctcc agcaatgttc
      181 aatccaacga cttttgcatt gattgattga ttttctctgc tcgtgtgatt gtgtgattgg
      241 aatcgactag cttgaaccaa ttgatagtat ccctgtgctg tgcgtgcatt gcatgtgtac
      301 atattaccaa atctctgttg catatggatc cactcttgga tatcggtttt cgcttgaatg
      361 ccgttttctt ctgttatttt gttgttcctt tttttaagct ataaaaccca accttctctt
      421 tatgatctgt ttgttttcaa tattgtaatt ttttttctgg aatttgttgt taattataac
      481 cttttcatta tctcctgagc tagcagattg atgatgaaac aatttctcca agcgtttgtt
      541 acgctgacat ccatatatga tggagggcta tgttaccata gccttcatag ttttcaatct
      601 gaaccatctg ctgctcaatc attttcccca ggtttttttt acagcgattg tttctccatt
      661 gctaactgtt ctgtattgat ttgggattca aattcctttc atggtttttg ctcgttttct
      721 ttacaatctc attcatttgt ctgtgcaaca tttgggaaaa attgggagaa gtgatgatat
      781 tatatccata ccacatttct gcattcacta tgatgatcat taacttcatg cactaccatc
      841 tgatctccca ctacacataa taaagttatg gtacaaggta tataaattga agttgtgcaa
      901 tgatggactg attttcattt acacgctgaa tttattttgt taattaatgt gcaatctgtg
      961 atgcaaataa tcccatttgc tgaatcactg tgattattgc aatcaaaatc accatctttc
     1021 ggctgagatt gcacattgtt attctgcaaa atttatcttt gttttaaatt aaggtttatg
     1081 ccatttggta tctgacacat aatcatttct ctgattatgt gtctcgaaac atggcagaaa
     1141 gtgaggggga acggtccttg cgacactggt tgctactata tgagcttcta gttactatat
     1201 acccgtttac atttccttgc ttttttagta tttctgttta acttttgtca tgcctatgtg
     1261 ttgtgatgca ttagttttgt actgtggaga ttgtacccct gtcaaaccac ttaatgaaat
     1321 tacagataat tattagactg aaaatgccgt cttttggctg aatcactctg atcaatcaaa
     1381 atcaccatat ttcagctgag attgcacatt gttgttacgc gaaacaattt tatctttgtt
     1441 ttaaattaag gttcagccat ttggtatctg acacataatc atttctctga ttacatgtct
     1501 cgaaacatgg cagaaagtaa gggggaacgg tccttgcgat gctggttgct gctatatgag
     1561 cttctagtta ctatataccc gtttacatat cctttgcttt cttagtattt ctgtttggct
     1621 ttattcatta gttatgccta tgtgttgtaa tgcattagtt ttgtactgtg gagattgtat
     1681 gtctatcaaa ctacttaatg aagttacaga taaatattag actgaaagtc taaaatcact
     1741 gtagcatatt gggctaaaag gtatagtttg tttacttgga atctctcgaa agtttgtttg
     1801 attgctgaat ttgtgctcca gtttgtttgc tgtttcttac atgaagcatt acctgtcctg
     1861 atgttattta tcacttatga gatttgtgta tgcagtttcc attttttcag tgcctgttat
     1921 gcagatgcca agcgtctcat tggccggaga tttactgatg cttctgtcca gagtgatatt
     1981 aagctctggc ccttcaaggt cattgctgga cctggtgaca agtcaacgat tgtggttcag
     2041 tacaagggtg aagagaagca ggttgcagct gagatgccaa gcgtctcatc ggccagagat
     2101 ttactgatgc ttctgtccag agtgatatta tgctctggcc cttcaaggtc atcgctggac
     2161 ctggtgacaa gtcaatgatt gtggtccagt acaagggtga agagaagcag tttgcagctg
     2221 aggagatctc ttctatggtc ctcatcaaga tgcgtgagat tgctgaagct taccttggca
     2281 ccaccataaa aaaagctgtc gtaacagttc ctgcttactt caactactca cagaggcagg
     2341 ctaccaagga cgctagggtc attgctggcc tcaatgtcat gcgtatcatc aatgagccta
     2401 ctgctgctgc cattgcctat ggtcttgaca agaaggcttc cagtgttggt gagaagaacg
     2461 tcctcatctt cgaccttggt ggtggtacct ttgatgtctc tcttctcacc attgaggagg
     2521 gaggtcaagg ccacagctgg tgacacgcat cttggtggtg aggactttga caacagaatg
     2581 gtgaagcact ttgttcagga gttcaagagg aagagcaaga aggacatcac tggcaaccca
     2641 aggcctgtcg ggaggctgag gacagcttgt gagtgggcga agaggactct ctcccctcca
     2701 cttcccagac cacccaccat tgagattgac tccctgtacg agggcatcga cttctactcg
     2761 aacatcacct gcgccaggtt cgaggagctg accatggatc tcttcaggaa gtgcatgagg
     2821 ggataccaag atggacaaag agcagcgtgc acgatgttca tccttgttgg tggctccacc
     2881 aggattccca gagtgcagca gctcctccag gacttcttca atggcaagga gctctgcaag
     2941 aacatcaacc ctgatgaggc cgtcgcctat ggcgccgctg tccaggcccc catcttggtc
     3001 tggagacggc cagaggagtg atgacctaga aggagcaggc cggtcttctc cacctactcc
     3061 gacaaccggc ctggtgtgtt gatccaggtg tacgagggcg atgggagagg accatgacac
     3121 cattgagtaa gtgaggagat cgagaagatg gtccaggacg cggagaagta caagtcggag
     3181 gacgatgagc tacatcgaag aacatgcaca aacaccatca aggtccgagc acccacgcgg
     3241 cggccaagaa gatgggagga cgcggtggga gattgagcca agatggacga ggacgtgccg
     3301 ttaaattttg gctgatcatg gtggttaaat tttggctacg ttgtaatgaa aaatgcattg
     3361 gttgcttcgt taaagtaata gtactacaat tgttctgttt cggttcatcc gcatttgcct
     3421 tttgattttt gtttagctgc tacttaaatc gcgtttattt tgcatacagt atctatctgt
     3481 cttctccaaa gcgttggggt gtgcttttct tccccggtgg tattcactat tcagagtctt
     3541 ttgtcgtcgt gtctgctcta atatgccatc cattgtaggg agtggattac gtccccccat
     3601 cgtgtatctt tttctttcaa aatcaatgca aatagttgtt aaaaattctg
//