LOCUS AK099320 1787 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033008O14, full insert sequence. ACCESSION AK099320 VERSION AK099320.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1787) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1787 /clone="J033008O14" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1787 /db_xref="Osa1:LOC_Os04g53700" /note="(Rice Genome Annotation Project) MYND finger family protein, expressed" /note="mapping to R04-TIGRv4S1-001123R (Chr.4: short arm=31783678, long arm=31788212, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 475 a 350 c 451 g 511 t ORIGIN 1 tgaaggtctc gagaacaaaa ccccccaaac cccacggcgg cggcggcgag cggcggcgga 61 agaagcagcc gcaagaggca gcagctcgcg ctggcggcgg catgggtggg agcagcgcaa 121 gcccgtgtga cctggacagg gagttcgcgc cccaaatcgc ccagctcctc gccacccctc 181 ctctccaacc cgcgcaggaa tactacaatg ggctcataca gtccaggaaa catgatggta 241 taagagtgaa cttcagcagc aagcatggga aaggtgtttg tgcgaacaag gagtttgcag 301 aaggggacct tattctgaag gatcaaatat tggttggtgc tcagcacagt cttaacaaga 361 ttgattgcgc tgtgtgcagt tattgctttc gcttcattgg ttctatagag ttccagattg 421 gacgaagatt gtattggcaa agcgttggtt caagcagtga ctgcactaat aggaggcatt 481 gccatgagag tgatttggga tcgagtgcca gttcttctgg tgcaacaaag gaaaacagta 541 gtactttgcc agaagaggtc ttaggatcac ttattactgg tgacatgtca ctgcctttca 601 cagaccattt tagtttgcct caagttgttc cttgtcgtgg atgtgaggaa gaacgctact 661 gcagccaatc atgtgctgat tccgactggg aaacttatca ctctttgctg tgtactggat 721 ctaagactga accatcccag agatctgctc ttcagaaatt catagaacat gcaaatgggt 781 ccaatgatat ttttcttgtt gctgccaagg ctatcacttt cactctgctg aggtacaaga 841 aactcaaaac gcagcctgaa tttcaaaata acacagatga atcaaacttt tctttgctta 901 tggaagcatg gaaaccactt tcgatgggct acaaaaagag gtggtgggac tctgttgctt 961 tgcctgagga tgttgattcc tgtgatgaag atacatttag gcagcaaatt agggatctag 1021 cacttacgtc attgcagctt ctcaaggatg ctatttttga ttctgagtgt gcacccttgt 1081 tctcacttga cgtgtatggc catttaattg gcatgtttga gctgaacaat cttggtttgg 1141 ttgttccgtc tccagtggaa gactatttca tacatattga tgatcttcca gatgatgaga 1201 aggaggaagc tgaaaaggtt acaaggccat ttctagatgc tttaggtgaa gactatgcag 1261 ctccttgtga ggggacggca ttctttcctt tgcaaagctg tatgaatcat tcatgttgtc 1321 caaatgctaa agcatataaa agggatgagg atactgatgg taatgcagtg ataattgctc 1381 tggagcctat caagaaggac gatgagatta ccatatccta catcgatgag gatgtctcct 1441 acgaggagag gcaggcggag cttgcagatt atggattcat ctgtacgtgc cctaggtgcc 1501 aagaagaaaa gcccaactga acaagatcca cagtttggag gttcctgaaa tttatttttt 1561 tggtgtggaa tatgcaattg aagttttgac gactccattt attttatttt ttttgtctag 1621 gatatgcaat tgagattttg acaactccaa aaatgttagg ataggatatg cggaaagaat 1681 gatatgatac gtacttattt gagtggatgc tggattttgc tgtgctaatg ttggatgctg 1741 cagaaagttt ttattccttc tgttcagttg agatttttcc ttttgtg //