LOCUS       AK073972                2639 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033072J21, full insert
            sequence.
ACCESSION   AK073972
VERSION     AK073972.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2639
                     /clone="J033072J21"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             113..1087
                     /db_xref="Osa1:LOC_Os02g49600"
                     /db_xref="RAP-DB:Os02g0728500"
                     /note="(RAP Annotation release2) Similar to Receptor
                     protein kinase-like protein"
                     /note="(Rice Genome Annotation Project) BRASSINOSTEROID
                     INSENSITIVE 1-associated receptor kinase 1 precursor,
                     putative, expressed"
                     /note="mapping to R02-TIGRv4S1-001308R (Chr.2: short
                     arm=30310272, long arm=30313936, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG93736.1"
                     /translation="MAMEVALAVYSLVLLASFSFPCRLASALLSPKGVNYEVQALMMI
                     KTSLKDPHGVLKNWDQDSVDPCSWTMVTCSPENLVTGLEAPSQNLSGLLSASIGNLTN
                     LEIVLLQNNNINGPIPEEIGRLTKLKTLDLSSNHFSGGIPNSVGHLESLQYLRLNNNT
                     LSGAYPSSSANLSQLVFLDLSYNNLSGPVPGSLARTFNIVGNPLICAAGTEHDCYGTL
                     PMPMSYSLNNTQGTLMPAKSKSHKVAIAFGSTIGCISFLIPVMGLLFWWRHRRNHQIL
                     FDVDGKQKAKLLSIMPQCSSNLGAYWHAMVVFIVTHWLLQSNTQRMST"
BASE COUNT          711 a          611 c          630 g          687 t
ORIGIN      
        1 gaattgtgag aagagaaggc tgcatgcttc ttttccttgg cctcaccctt cctccatgtt
       61 tgaacacacc accacaagcg attagccctt cctctcctgc ttccgccctt ccatggcaat
      121 ggaggtggct cttgcggttt actcactggt gttgcttgcc tccttctcct tcccttgcag
      181 gcttgcaagt gccctcctct ctcccaaggg tgtaaactat gaagtgcaag ctctcatgat
      241 gatcaagact tccctcaagg atcctcacgg tgtgctcaag aactgggacc aagactccgt
      301 ggatccttgc agctggacca tggtcacttg ctcacctgag aaccttgtca ctggcctgga
      361 ggctccaagc cagaatcttt ctggcctgct ctccgcaagc ataggcaact tgaccaatct
      421 tgagatagtt cttctgcaga acaacaacat caatggtcca attccagaag agattggcag
      481 gctaacaaaa ctcaaaacac ttgatctctc cagtaaccac ttctctggtg gaatcccaaa
      541 ctcagtaggc cacctcgaaa gcctccagta cttgaggctc aacaacaaca ccctgtctgg
      601 tgcataccct tcatcatcag ctaatttatc acagcttgtt ttcctggacc tttcgtataa
      661 taatctgagt ggtccagtac ctggttcttt ggcaagaacg ttcaatatag tggggaatcc
      721 gttgatctgt gctgcgggta cggaacatga ttgttatgga actttaccaa tgccgatgtc
      781 ctacagcctg aataatacac agggtactct gatgccagca aaatctaaaa gccacaaggt
      841 tgcaattgca tttggttcta caattggctg catcagcttc cttatccctg ttatgggatt
      901 gctgttctgg tggaggcata ggcgaaacca tcaaattctt tttgatgttg atggtaagca
      961 aaaagccaaa ctactatcca taatgcctca atgctcgtca aacttggggg catactggca
     1021 tgcgatggtt gttttcattg taacgcattg gctattgcag agcaacacac agagaatgtc
     1081 aacctaggaa atgtgaagag gtttcagttc agagagcttc aggttgcaac agagaacttc
     1141 agcaataaga acatcttagg aaaaggcggc tttggaaacg tttaccgggg aaagctacca
     1201 gatggaactg ttgtagctgt caagaggctg aaagatggta atgctgcagg cgggcaggca
     1261 cagtttcaga ctgaagttga gatgatcagc ttggcgcttc accggaacct cctcaggctt
     1321 tatgggttct gcatgactgc tactgagagg cttctggtat atccatacat gtcaaatggg
     1381 agtgtcgcat tgcgtctgaa agggaagcca ccattggact ggatcaccag acagaggata
     1441 gcactcggtg cagcaagagg cctactgtac ctgcacgagc agtgtgaccc caagattatt
     1501 catagggacg taaaggcagc caacatattg cttgatgact actgtgaagc cattgttgga
     1561 gattttgggc ttgccaagct cctagatcat cgtgactcac atgtcaccac agctgtcagg
     1621 ggtaccgttg ggcacattgc cccggaatac ctctccaccg gccagtcatc tgagaagacc
     1681 gacgtctttg gttttggaat tctgctgctt gaattgatca ctggtcaaac tgcacttgaa
     1741 tttgggaagt catcaaatca gaagggagcc atgctggact gggtaagttc attaccattt
     1801 ccaaagagtt tggagcatgg gaaaattatc gctagaataa ggctagcata tctgtctacc
     1861 aaatcttgtc tcttgccttg acattggctt gtgttcaggt gaagaagatg caccaggaga
     1921 agaagctcga cgtgcttgtc gacaagggcc tgagaagcaa ctacgaccgt gtcgagctgg
     1981 aggagatggt gcaggtggca ctgctgtgca cccaatatct ccctggtcac aggcccagga
     2041 tgtcagaggt ggtcaggatg ctggagggag atggactggc agagcggtgg gaagcatccc
     2101 agcgcgctga ctcacacaag ttcaaagtgc ctgagttcac cttcggtcgc tgctactctg
     2161 acctgacgga tgactcgtca ttgctggtcc aggcagtcga gctctctggg ccgagatgac
     2221 acgataacaa atagtggaag gcaaaccatc attagttgtt tgcagcagga tctgtacagc
     2281 aagagacacc actgtacaat ggaaaaatag ccaaaaaaaa aaatttaaag caagcaactg
     2341 catgccaatg caaaatcaca aatcgaagca ggtatcagat cagctgtaca aagattaaaa
     2401 gaagagcact tcctaggcat aggatatttc tacttttaca gattctgtaa ctattggtag
     2461 aataagtttg cagagcaata tttttcaaga tgtaacattt tgtttatgct tttttcctcc
     2521 cttgtacctt ttgccttagc tagtgttagt taaaaaagaa actgttgtca ttggattata
     2581 aagacttggc aatgacattt ttgtgcattg atgcaaagct tgaaaatgca tcaaatagc
//