LOCUS       AK073880                2317 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033071G17, full insert
            sequence.
ACCESSION   AK073880
VERSION     AK073880.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2317
                     /clone="J033071G17"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2317
                     /db_xref="Osa1:LOC_Os09g28300"
                     /note="(Rice Genome Annotation Project) remorin,
                     C-terminal region family protein, expressed"
                     /note="mapping to R09-TIGRv4S1-000466F (Chr.9: short
                     arm=17183096, long arm=17187314, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          673 a          478 c          583 g          583 t
ORIGIN      
        1 gagcattcgc cgagccacac gacgaggagg agggggacga ggtgttgtgt ggggtggtgg
       61 aaggggactg ggcacagctg caagaaccaa ccaagagtcc ggcagaccgt accaccggag
      121 aatgcctgta ccagcggcgc cggtcagaag ctgttctttt gcagggtagg aaggggttga
      181 agcaacggcc agcctctctg gactttggca gcggcagccc cgggttcaat ggagcccctc
      241 tttctccggg ctttgtggtt gggggtgtgg gtttgatgaa caagggtctt gtgtcatcat
      301 cattcatcag atcagacgtt tttcctagtc ccaggacacc gaactatcgg cggcatcgtt
      361 catcagtatt tggttaccaa aaggggtgga gctctgagag agtaccgctt gcttccaaag
      421 gtaacaggag gtacccaggc agcagcatgg catttccctt cagcaatggg aggacattgc
      481 cctccaaatg ggaggatgca gagagatgga tcttcagtcc gaattcgagt gacgtgctcg
      541 agaagacttc atttgctcct gctcggcgac caaagtccaa aagtggtcca ttagggcctc
      601 ctggaaaatt tggtggacaa tactcatctg tgtcattgct tgacaatggg agggttggac
      661 atttgacagc aaactcgcct ttcttggctg gagtactgat accagaacat tattgtggag
      721 agaaagataa cattgggagg tatatgagca gaacagctgg tgaggaggcc agcattggca
      781 ttggaggcaa gtcttgtctg gcaaatggtg ggtctcatgc tactcaatat aacagagttc
      841 gtcgacgact ggatactgcg attgagtcat caccttcatt gcctagcacc caagcgtctg
      901 tacaagatga acaggttgga atcacagaag agtcagcctc cattatcacc cctataattt
      961 tgcggaagga tgcggcaact caaacaagcc caaatctaag tcggtcatct tcgcccagtg
     1021 tcagtactcc atttatccat ttgcttacga cacaccaagt cagagaaaag gagaattgtt
     1081 tctctgatgt tatcagggat gtgcacatgg acgatcgagt gactcttacc aggtggtcca
     1141 agaaacatgt tacacgagca tctagcaaga actcaacaaa tgttatagat gtgaagaaaa
     1201 agacagtgga gtctaagtct tcttcctggg aattaacaga agcaaaatcc atatcaaagg
     1261 ttgagcgaga gcaagaaaaa attactgctt gggaacacct ccaaaaagcc aaggctgagg
     1321 cagcaatcca aaagttagtg atgaaaatcg agaaaaagag atcatcttca ctggacaaga
     1381 tttggaacac cctcaggtct gcacaaagaa gagcacaggt aatgcgtgaa actgcagcag
     1441 caaaccagga tgagcaatct tccgggaagg ctaaaagggc atcacacctt aataagaacg
     1501 gccagatcag ctctctgagt ggctgcttca cttgccatgc cttctagtgt catgtagttt
     1561 aagaaggaac aggacttaaa gtaattcttc gtgttatcaa cacgctcgtg ttgacttagt
     1621 gaagttcaga gatttacaga ataaagatga tccagcagat ggaaattatc cccccttgga
     1681 ttttgacaag atgctgctgc aacaatgggg gaccatgcat tatcatgata tagatttcta
     1741 cagttctgct ttgtgttagt ttcgattctg ccatgggggg acaagagaaa atggtgccac
     1801 gaaggaaagg tgaaattctt ctgcatacat cccatgtgcc tgattgatat cttagcacaa
     1861 tgataattga taaggtcctc ctctatcatt cattacccat taccaacatt ctagatgcta
     1921 tgagtttgtg tgcgatgaaa acaaagcaga tatgtatcat ttgcaccaca attccaacgg
     1981 atagataaga agggaatgtt tcagtcagag ggaatacagt gccttactgt gattcatgct
     2041 ggaaaactct actggattgt gaaagggaac caggtggaat gcaatagatt tagctagcgt
     2101 atgctacatt tgcatacaca gttacaatag catgtgttgg agaaaaatat aggaatacag
     2161 gagaatagag attctgtttg aatttcatgg caatttgaca agctcttcgc agaacaactc
     2221 tcccatttct gtaatgagct gtttcttgta attcctattg caacacatag gcgttactga
     2281 atgttgataa atgatattgc catcgcaatt ttttttt
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