LOCUS AK073880 2317 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033071G17, full insert sequence. ACCESSION AK073880 VERSION AK073880.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2317) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2317 /clone="J033071G17" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2317 /db_xref="Osa1:LOC_Os09g28300" /note="(Rice Genome Annotation Project) remorin, C-terminal region family protein, expressed" /note="mapping to R09-TIGRv4S1-000466F (Chr.9: short arm=17183096, long arm=17187314, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 673 a 478 c 583 g 583 t ORIGIN 1 gagcattcgc cgagccacac gacgaggagg agggggacga ggtgttgtgt ggggtggtgg 61 aaggggactg ggcacagctg caagaaccaa ccaagagtcc ggcagaccgt accaccggag 121 aatgcctgta ccagcggcgc cggtcagaag ctgttctttt gcagggtagg aaggggttga 181 agcaacggcc agcctctctg gactttggca gcggcagccc cgggttcaat ggagcccctc 241 tttctccggg ctttgtggtt gggggtgtgg gtttgatgaa caagggtctt gtgtcatcat 301 cattcatcag atcagacgtt tttcctagtc ccaggacacc gaactatcgg cggcatcgtt 361 catcagtatt tggttaccaa aaggggtgga gctctgagag agtaccgctt gcttccaaag 421 gtaacaggag gtacccaggc agcagcatgg catttccctt cagcaatggg aggacattgc 481 cctccaaatg ggaggatgca gagagatgga tcttcagtcc gaattcgagt gacgtgctcg 541 agaagacttc atttgctcct gctcggcgac caaagtccaa aagtggtcca ttagggcctc 601 ctggaaaatt tggtggacaa tactcatctg tgtcattgct tgacaatggg agggttggac 661 atttgacagc aaactcgcct ttcttggctg gagtactgat accagaacat tattgtggag 721 agaaagataa cattgggagg tatatgagca gaacagctgg tgaggaggcc agcattggca 781 ttggaggcaa gtcttgtctg gcaaatggtg ggtctcatgc tactcaatat aacagagttc 841 gtcgacgact ggatactgcg attgagtcat caccttcatt gcctagcacc caagcgtctg 901 tacaagatga acaggttgga atcacagaag agtcagcctc cattatcacc cctataattt 961 tgcggaagga tgcggcaact caaacaagcc caaatctaag tcggtcatct tcgcccagtg 1021 tcagtactcc atttatccat ttgcttacga cacaccaagt cagagaaaag gagaattgtt 1081 tctctgatgt tatcagggat gtgcacatgg acgatcgagt gactcttacc aggtggtcca 1141 agaaacatgt tacacgagca tctagcaaga actcaacaaa tgttatagat gtgaagaaaa 1201 agacagtgga gtctaagtct tcttcctggg aattaacaga agcaaaatcc atatcaaagg 1261 ttgagcgaga gcaagaaaaa attactgctt gggaacacct ccaaaaagcc aaggctgagg 1321 cagcaatcca aaagttagtg atgaaaatcg agaaaaagag atcatcttca ctggacaaga 1381 tttggaacac cctcaggtct gcacaaagaa gagcacaggt aatgcgtgaa actgcagcag 1441 caaaccagga tgagcaatct tccgggaagg ctaaaagggc atcacacctt aataagaacg 1501 gccagatcag ctctctgagt ggctgcttca cttgccatgc cttctagtgt catgtagttt 1561 aagaaggaac aggacttaaa gtaattcttc gtgttatcaa cacgctcgtg ttgacttagt 1621 gaagttcaga gatttacaga ataaagatga tccagcagat ggaaattatc cccccttgga 1681 ttttgacaag atgctgctgc aacaatgggg gaccatgcat tatcatgata tagatttcta 1741 cagttctgct ttgtgttagt ttcgattctg ccatgggggg acaagagaaa atggtgccac 1801 gaaggaaagg tgaaattctt ctgcatacat cccatgtgcc tgattgatat cttagcacaa 1861 tgataattga taaggtcctc ctctatcatt cattacccat taccaacatt ctagatgcta 1921 tgagtttgtg tgcgatgaaa acaaagcaga tatgtatcat ttgcaccaca attccaacgg 1981 atagataaga agggaatgtt tcagtcagag ggaatacagt gccttactgt gattcatgct 2041 ggaaaactct actggattgt gaaagggaac caggtggaat gcaatagatt tagctagcgt 2101 atgctacatt tgcatacaca gttacaatag catgtgttgg agaaaaatat aggaatacag 2161 gagaatagag attctgtttg aatttcatgg caatttgaca agctcttcgc agaacaactc 2221 tcccatttct gtaatgagct gtttcttgta attcctattg caacacatag gcgttactga 2281 atgttgataa atgatattgc catcgcaatt ttttttt //