LOCUS       AK073876                1644 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033072L16, full insert
            sequence.
ACCESSION   AK073876
VERSION     AK073876.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1644
                     /clone="J033072L16"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             191..1096
                     /db_xref="Osa1:LOC_Os07g48550"
                     /db_xref="RAP-DB:Os07g0684800"
                     /note="(RAP Annotation release2) Similar to NAM /
                     CUC2-like protein"
                     /note="(Rice Genome Annotation Project) NAC
                     domain-containing protein 21/22, putative, expressed"
                     /note="mapping to R07-TIGRv4S1-001017R (Chr.7: short
                     arm=29038762, long arm=29040604, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG93687.1"
                     /translation="MSESEVSVINQLEEEETRLELPPGFRFHPTDEEVVTHYLTRKAQ
                     DRSFSCVVIADVNLNNCEPWDLPSKAKMGEKEWFFFCHKDRKYPTGMRTNRATASGYW
                     KATGKDKEIFRGRGLLVGMKKTLVFYMGRAPRGEKTPWVMHEYRLDGKLPPNLPRSAK
                     EEWAVCRVFNKDLAAKIAQMPPPPFPRNDSFDLDLDDFLHLDADLPPLIDDPFASTST
                     LKTEPPPPANLMHNHYGYFSLPASATNYNHSSGAMADQAIRRFCKAEASTACFSGADA
                     DVDPVVDELLSFPDSITDYSYIWKA"
BASE COUNT          371 a          447 c          440 g          386 t
ORIGIN      
        1 gcttcctaaa cccatctcga tccctaccta gctaagctat ttcattcaca cctcgatcaa
       61 tctcgatcgt ctctctcgtc tactactagt actagcttct tctcctccat ttctgacctg
      121 agctagctca gaacagagag ctgagaatca tcagctagct agctaggcgt ctggggagag
      181 agcaggagcc atgtcggagt cggaggtgtc ggtgatcaac cagctggagg aggaggagac
      241 tcggctggag ctgccgccgg ggttccggtt ccaccccacc gacgaggagg tggtgaccca
      301 ctacctcacc cgcaaggccc aggaccggag cttctcctgc gtcgtcatcg ccgacgtgaa
      361 cctcaacaac tgcgagccat gggacctccc aagcaaggcg aagatggggg agaaggagtg
      421 gttcttcttc tgccacaagg accgcaagta cccgacgggg atgaggacga accgggcgac
      481 ggccagcggg tactggaagg ccaccgggaa ggacaaggag atcttccgcg gccgcggcct
      541 cctcgtcggc atgaagaaga cgctcgtctt ctacatgggc cgcgcccccc gcggcgagaa
      601 gaccccctgg gtcatgcacg aataccgcct cgacggcaag cttcccccca acctcccccg
      661 ctccgcaaag gaggaatggg cggtttgccg ggtgttcaac aaagacttgg cggcaaagat
      721 tgcccaaatg ccgccgcctc ccttcccgcg caacgactcc ttcgacctcg acctcgacga
      781 cttcctccac ctcgacgccg acctgccgcc gctcatcgac gaccccttcg cctccacctc
      841 cacgctcaag acggagccac ctccgccggc caacctgatg cacaaccact acggctactt
      901 ctccctcccg gcgtcagcga ccaattataa ccacagctcc ggcgccatgg cggaccaggc
      961 gattcggagg ttctgcaagg cggaggcgtc gacggcgtgc ttctccggcg ccgacgctga
     1021 cgtggatccg gtggtggacg agctgctctc cttcccggac tccatcacgg actactccta
     1081 catatggaag gcctgaccag attaatttcg tggttaattt gccatatgat cgatcagatt
     1141 aatcctgttt aattagttgg tttattaact tgattactgt caaaggtttg ggttaactag
     1201 gagatgatga tgatggagtt tgtggtgatg cgagagagag agagattagg tcgcgctgat
     1261 ctggtctgat caaggtgtgc agagcagatg gagcggacta attcattaat tagcttaatc
     1321 aaattagtta tataggtttg tttgtcttaa ttctgtatgt atatagttat ctgattgggg
     1381 ataatacata gagattacta gctagctagc tagtttggtg attagggggg tgatgagcta
     1441 gctagagaga gatatctcat caaaattaag gtctcggttg gttgattaat ctgcagatta
     1501 tatattgcct tgtgtgtgat aggccatgtg gcctctttct gtgtatgtgt gtgtgtggat
     1561 ggaaggagta aattaactaa accccttgta catgtaccat cagttgtgct ttacttacat
     1621 gatcaattca accattgatc gatt
//