LOCUS AK073720 1537 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033063N13, full insert sequence. ACCESSION AK073720 VERSION AK073720.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1537) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1537 /clone="J033063N13" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1537 /db_xref="Osa1:LOC_Os01g53840" /db_xref="RAP-DB:Os01g0741200" /note="(RAP Annotation release2) Protein kinase-like domain containing protein" /note="(Rice Genome Annotation Project) protein kinase, putative, expressed" /note="mapping to R01-TIGRv4S1-001305R (Chr.1: short arm=31276226, long arm=31279252, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 417 a 306 c 360 g 454 t ORIGIN 1 tatggatggg ttattggcag catgggagtt gcacttgctt tgattgctat tgctctcctt 61 gcacttgttc tgtgcaagct ctcccaatac aatccccaag ctccaaataa ccagggaaag 121 agcccagacc agtctatatc acacaagttt caacttctta agagtggtag tttttgttat 181 ggttctggaa gatacttatg ttgccaattt ggaaatgtga aacaatcaag aacggatggc 241 agtgatcatc atatgaatac cccaaaaggt gttgtagtgg acgtgtttga tagggagaag 301 cccattgtgt ttacctatca agaaatactt gcatcaaccg attcattttc tgatgcaaat 361 cttctgggtc atggtacata tggctctgtt tattatggtg ttcttcgaga ccaggaggtc 421 gctataaaga gaatgacagc aactaaaact aaagagttta tagtggagat gaaagttctt 481 tgtaaggtcc atcatgccag tctggtagag ttgattggct atgcagcaag caaggatgaa 541 ctatacctta tttacgagta ctctcaaaaa ggttcactca agaatcacct tcatgatcct 601 caaagcaaag gttacacatc attgtcttgg atctacaggg tccaaattgc tcttgatgcg 661 gctagaggac ttgaatacat tcatgagcat acaaaggatc attatgttca cagggacatc 721 aaatcgagta acatcttgct cgatgaatcc ttcagagcaa agatttcaga ttttggtctt 781 gcaaaactgg tagtgaagtc aactgatgca gaggcttctg tcacaaaagt tgtgggtaca 841 tttggttact tggcccctga atacttgcgc gatggcctgg caactacgaa aaatgatgtt 901 tatgcttttg gagtagtact ttttgagtta atatctggaa aggaggcaat tacaaggact 961 gatggattga acgaaggatc aaactcagaa aggcgttcct tggcatcagt tatgttgagt 1021 gcactaaaga attgtcgtaa ctcaatgtat atggggagcc tgaaagactg cattgaccct 1081 aatctaatgg acctgtatcc acatgactgt gtatacaaga tggccatgct agcgaaacag 1141 tgcgtggagg aagatcctgt tcttcggcca gacatgaagc aggcagtaat cgcgctatcg 1201 caaatactgc tgtcgtcgat cgagtgggaa gcgacgctag ctgggaacag ccaagtgttc 1261 agtggtcttg tggctgggag gtgatcctgt aagattggcc tggttgctac ggtgctatcc 1321 catgcgctct tcggtgatct ccttccctgc tccactagag gcgttttccc ctgtaacctt 1381 ctcctgcatt ttgctggttt cttgcccagt tgagcagttt tctgcatctt cttttcaaag 1441 tatctaccac agtgcaatat atttcttggt gggtgatatg taaccatgta tgtataccaa 1501 atgtgccttg caagttctaa tgcaatgatc ttgcacc //