LOCUS AK073448 1618 bp mRNA linear PLN 04-DEC-2008
DEFINITION Oryza sativa Japonica Group cDNA clone:J033045A20, full insert
sequence.
ACCESSION AK073448
VERSION AK073448.1
KEYWORDS CAP trapper; FLI_CDNA.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
Yazaki,J., Yokomizo,S. and Yoshimura,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Department of
Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE 2
AUTHORS The Rice Full-Length cDNA Consortium, National Institute of
Agrobiological Sciences Rice Full-Length cDNA Project Team:,
Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
International Science Genome Sequencing & Analysis Group:,
Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
from japonica Rice
JOURNAL Science 301, 376-379 (2003)
COMMENT This clone is one of the 28K full-length cDNA clones from japonica
rice.
URL : http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
and Yamamoto,M.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1618
/clone="J033045A20"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
CDS 166..1314
/db_xref="Osa1:LOC_Os02g48720"
/db_xref="RAP-DB:Os02g0718900"
/note="(RAP Annotation release2) ADP,ATP carrier protein,
mitochondrial precursor (ADP/ATP translocase) (Adenine
nucleotide translocator) (ANT)"
/note="(Rice Genome Annotation Project) ADP,ATP carrier
protein, mitochondrial precursor, putative, expressed"
/note="mapping to R02-TIGRv4S1-001257F (Chr.2: short
arm=29816066, long arm=29819252, direction=forward) for
TIGR Pseudomol ver4"
/protein_id="BAG93461.1"
/translation="MAEQANQPTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRF
TTRSYMTQGLVNGGINVPMMSSSPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAP
IERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQ
ALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLAND
AKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKP
VVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQ
ILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA"
BASE COUNT 364 a 390 c 423 g 441 t
ORIGIN
1 gggcggagat aaaaaggcac gcagccgctc caagaaaccc tcgcccccac gacgctcgct
61 ctctcctctc tctccctctt ccgccgccgc gcttggggaa ggaaggagaa agcaagccat
121 cggcccccgc ctccgcctcc gaagggacat tgttgctagt tggtgatggc tgagcaggct
181 aatcaaccga ctgtccttca gaagttcggt ggccagttcc accttggctc cagcttttct
241 gaaggtgtac gggctcgcaa catctgccca tctgtctcat cctatgacag gcgctttacc
301 acaaggagct acatgaccca gggccttgtc aatggtggca tcaacgtccc aatgatgtcg
361 tcctctccaa tttttgctaa tgctccagct gagaaaggtg gcaaaaactt catgattgat
421 ttcctcatgg gtggagtgtc agccgcagtt tcaaagactg ctgctgctcc gattgagcgt
481 gtgaagctgc ttatccagaa ccaggatgaa atgatcaagg ctggtaggct ctcagagcca
541 tacaagggta ttggggactg cttcggacgc actatcaagg atgagggttt tgcttcattg
601 tggagaggaa acactgccaa tgtgatccgt tacttcccca cccaggcttt gaactttgct
661 ttcaaggatt acttcaagag gctgttcaac ttcaagaaag acaaggatgg ttactggaag
721 tggtttggtg gcaaccttgc ctctggtggt gctgctggtg cttcatctct gttttttgtg
781 tactcccttg actatgctag gacaaggttg gccaatgatg cgaaggctgc caagggagga
841 ggtgaaaggc agttcaatgg ccttgtggat gtttaccgca agactctcaa gtcagatggc
901 attgctgggt tgtaccgtgg atttaacatc tcatgtgttg gaatcattgt ctaccgtggt
961 ctgtactttg gaatgtatga ttctctgaag ccagttgtac tcactgggtc tctccaggac
1021 aatttctttg caagctttgc ccttgggtgg ctgatcacca acggtgcagg tcttgcctct
1081 taccccattg ataccgtccg cagaaggatg atgatgacct ctggagaggc tgtcaagtac
1141 aagagctcca tggatgcttt ctcccagatc ctgaagaacg agggtgccaa gtcactgttc
1201 aagggtgctg gtgccaacat cctacgtgcc attgctggtg ctggtgtgct ctcaggctat
1261 gaccagctgc agatcctctt ctttggaaag aagtacggct cgggcggtgc ctaaactggc
1321 agaaaatgat gacgaacaag tgtttattcc tggtcctgca ctaacgggat ctggtgaatt
1381 ttgccttttt aacattgaaa acaataataa ttcttgtagg ggagaacact ccccgacatt
1441 cgttttttgg tggaagcgtt tatctccaaa cattgtcata ggcggaggcg ttaatcgcaa
1501 acagtttacc atcatagggt tgagtttgag ttgagtctgg ccggctctgt tatgtctggc
1561 gattttccta ccatacatta ccctcggtga aatatcgaaa gattattgag ttgctgtc
//