LOCUS AK073291 1832 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033024B14, full insert sequence. ACCESSION AK073291 VERSION AK073291.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1832) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1832 /clone="J033024B14" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1832 /db_xref="Osa1:LOC_Os09g32840" /note="(Rice Genome Annotation Project) nucleotide pyrophosphatase/phosphodiesterase, putative, expressed" /note="mapping to R09-TIGRv4S1-000630R (Chr.9: short arm=19581082, long arm=19584460, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 431 a 494 c 506 g 401 t ORIGIN 1 ggtgtcaagg gggaagatac tgcctgggta actgttgatt tcgcagctcc gcatgcgagt 61 gacggcgatt ggatcggagt attctctcct tcaaatttca acgcgtccac atgccccggt 121 ccttctggat cagactcagg acctgttata tgctctgcac caataaagta tcagcttgca 181 aattattctt cagattatgg caagacagga aaaggcactc tcaagtttca gttgatcaat 241 cagaggcagg acttctcctt tgcactgttc actggtggtc tctcaaatcc aaagcttatc 301 gcagtatcaa ataagatcgc cttcgcaaac ccgaaagctc cggtttaccc tcgtctagct 361 caaggcaaat cctggaatga gatgactgtc acatggacta gtggttatga catcaaagag 421 gcatatccct ttgttgaatg gggcatgaaa tggagccctc ctacgcgcac agcagctggc 481 accgtcactt ttgatcgcga aagcttatgc ggagaacctg cccgtactgt tggttggaga 541 gatccaggtt tcatacacac agcattcctg actgatttat ggccaaataa agaatactat 601 tacaagattg gacatatgct acctgatgga aaaattgtat ggggcaaatt ttactccttc 661 aaagcacctc cttttcctgg gcaaaagtca ctgcagaggg ttgtcatttt tggtgatatg 721 ggaaaggccg agagggatgg aagcaacgag tacagcaact accagcctgg atcactgaac 781 acaactgaca cactgatcaa ggaccttgac aacatcgaca ttgtatttca catcggtgac 841 attacctatg ccaacgggta catttcccag tgggatcagt tcactcagca agtcgagccg 901 atcactgctc gagtccccta catgattgca agtggaaacc atgaacggga ttggccaaac 961 agtggatctt tcttcaatgg gacagattct ggaggggagt gtggggtgct tgctgagacc 1021 atgtactaca cacccacaga gaacagggca aactactggt acaagacgga ctacgggatg 1081 ttcagattct gcgtggcgga cagcgagcac gactggcggg aaggcacgga gcagtacgcg 1141 ttcatcgaga gctgcctcgc cacggtggac cggaagaagc agccatggct ggtgttcatc 1201 gcgcaccgcg tcctcggcta ctcctcgggc ttcttctacg gcgccggcgg cgccttcgcg 1261 gagccgacgg caaggcagag cctccagagg ctatggcagc ggcaccgcgt cgacctcacc 1321 ttctacggcc acgtccacaa ctacgagcgg acgtgcccgg tctacgacgg gcggtgcgcg 1381 tcgccggaga ggtcgcgcta ctccggcgcg gtgggcggca ccatccacgc ggtggtcggc 1441 ggcggcggca gccacctgag caacttcacc gccgaggcgc cgccgtggag cgtgtacagg 1501 gagatggact acggcttcgt caagctcacg gcgttcaact acacgtcgct gctctacgag 1561 tacaggcggt ccagcgacgg cgaggtgcac gacagcttca ccgtccaccg ggagtaccgc 1621 gacgtgctcg cctgcgtcgc cgacagctgc ccgccgacca tcccgccggc gacgtgatcc 1681 agctccggtg attccgccgg cgagtctgcc ggcgacgtgt gcactattgc tgcttggtgg 1741 tgcttgcggg cctcgtctgt aatcttgact tgtcaatcgt gtgtaaattg aattgcgaaa 1801 tatttcgaaa ttaagtcaaa taaagaaatg tt //