LOCUS       AK073129                2480 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033004H20, full insert
            sequence.
ACCESSION   AK073129
VERSION     AK073129.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2480
                     /clone="J033004H20"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2480
                     /db_xref="Osa1:LOC_Os03g43590"
                     /db_xref="RAP-DB:Os03g0636800"
                     /note="(RAP Annotation release2) Serine/threonine protein
                     kinase domain containing protein"
                     /note="(Rice Genome Annotation Project) LSTK-1-like
                     kinase, putative, expressed"
                     /note="mapping to R03-TIGRv4S1-001117R (Chr.3: short
                     arm=24305846, long arm=24311360, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          677 a          606 c          604 g          593 t
ORIGIN      
        1 gactttgaac tctcctcctc cccgcaccgc cgcatccctt tctttccccc accccttccc
       61 gctacgacaa accatagcat atcctcgtct caacactctc ctctgcctga tcaaaaaaga
      121 aaatcaaatg cggtgagatc tgcggggtcg tgatcctcaa accatttggc tctggtaact
      181 gcaactgcaa aacggcacag ccatggagca gtacgaggta ctggagcaga tcggcaaagg
      241 agcatttggt tctgccctgc ttgtcaggca caaggtggag aagaagaagt atgtgttgaa
      301 aaagatccgg cttgccaggc agacagaccg cactcgcagg tctgctcacc aggagatgca
      361 gctcattgcc acagtgagga acccattcat cgtggagtac aaggattcat gggtggagaa
      421 gggttgctat gtttgcatca ttataggata ctgtgaagga ggagacatgg ctgaagctat
      481 taaaagagct acaggtgatc atttctctga ggagaagctt tgcaagtggc ttgtgcagct
      541 cctcatggcc cttgactatt tgcatgcaaa tcacattctt caccgtgatg tgaagggatc
      601 aaagtataag actaggtgac tttgggcttg caaaaatatt gacctctgat gatctagcat
      661 cctctgtggt aggaacacca agttatatgt gcccagaact acttgctgat ataccttatg
      721 gtaccaaatc tgatatttgg tcactaggat gttgtatata tgaaatgact gctctgaggc
      781 ctgcatttaa agcttttgat atgcaagctc ttatcagtaa gatcaccaag tcaattgtgt
      841 cgccattgcc aactagatat tctggtgcat ttagaggact tattaagagc atgctacgaa
      901 aaagtccaga acacaggcca agtgcagctg aactactcaa gcatccacat ctccaaccct
      961 atgtgctgca agtccatttg aaatcttctc ctgctcgcaa cataattcct tcccatcagt
     1021 ctccgattga caaggttaag aaaatgacat ttcccactga gtccatgtgc agaagcaagg
     1081 gcaggagaaa ctctttgggt aatgagagaa tcgtgacctt cagcagacct tctcctgaaa
     1141 ggaagtttac tagttctatt cagagtatca aggattactc aactactcgg agtgtcaaag
     1201 atttatctat cgatgttagt ttggtcgagg aggttagtag taaaacaact tttaccacaa
     1261 gaacatcgag tattgtgaag actcccaaga gaactccaag caaaacaatc acaactcccc
     1321 agttagaacc tccaaaggta tcttacaaca gagtaaatcg gagcgagctg ctttcaagaa
     1381 caccggtgaa cagaagcgct cgggtaatcc gcagagcttc cctcccactc ccactgccat
     1441 catccgagac accgaagcgc ggcgtcagca gcatcagcat cctcgagcag ctggaatccc
     1501 ccgacgtatc cgtgaattcg cctcggatag accggatcgc cgagttcccg ctggcctcat
     1561 ccgaagatcc accgttcctc aagctccacg gacgccgctc tccaactcca acgccacagc
     1621 attgcgtcat cgaccagtcg atcaccaagg acaaatgcat ggtcgaagcg ttccacatca
     1681 tcgacgtcga tgacgacgac gggaggagcg actcgtcgtc gggccgtaac aacgccgcgg
     1741 cggctgcctc gagccgcgac ggctcgtcgg agtcgacgag gcagcggcgg ttcgacacgt
     1801 cgtcgtacca gcagcgcgcg gaggcgctgg aggggctgct ggagttcagc gcgcagctgc
     1861 tgcagcagga gaggtacgac gagctgggcg tcctgctcaa gccattcggc ccggagaagg
     1921 tgtccccgag ggagacggcc atctggctca ccaagagctt caaggagaca gggctgtaag
     1981 catatgcgat cactctcacc ttgctctaga aaacaaatga gcagaagcaa attaaattgt
     2041 agctcaggaa agattagttg ctgacagtgt gacaccatct cagtgttgcc tcccccaact
     2101 agcttatgaa agattattca gtgatcatct atggattaac aaggaagtag cggtagttct
     2161 atacttctat gtggtgttgg tctgaagcag gaagtagtag tagttcatgt ttctaaccat
     2221 gtaggagtac ttgacaggta aactgggcat tccagcccgg ctgaagaatc atccagttga
     2281 ttgattttgt ttctgtttga atagcatttc tcttgttcat gtaatcttga gttattgaag
     2341 gtttagagag agagagagag agagctgctt gccttgtatt atccaaagta ggaattcaga
     2401 caatggccat atctgatgga gacaacaaga agaatttgag gagcttgtac tgtactatgc
     2461 acaaagataa cgttcttgtc
//