LOCUS AK073129 2480 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033004H20, full insert sequence. ACCESSION AK073129 VERSION AK073129.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2480) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2480 /clone="J033004H20" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2480 /db_xref="Osa1:LOC_Os03g43590" /db_xref="RAP-DB:Os03g0636800" /note="(RAP Annotation release2) Serine/threonine protein kinase domain containing protein" /note="(Rice Genome Annotation Project) LSTK-1-like kinase, putative, expressed" /note="mapping to R03-TIGRv4S1-001117R (Chr.3: short arm=24305846, long arm=24311360, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 677 a 606 c 604 g 593 t ORIGIN 1 gactttgaac tctcctcctc cccgcaccgc cgcatccctt tctttccccc accccttccc 61 gctacgacaa accatagcat atcctcgtct caacactctc ctctgcctga tcaaaaaaga 121 aaatcaaatg cggtgagatc tgcggggtcg tgatcctcaa accatttggc tctggtaact 181 gcaactgcaa aacggcacag ccatggagca gtacgaggta ctggagcaga tcggcaaagg 241 agcatttggt tctgccctgc ttgtcaggca caaggtggag aagaagaagt atgtgttgaa 301 aaagatccgg cttgccaggc agacagaccg cactcgcagg tctgctcacc aggagatgca 361 gctcattgcc acagtgagga acccattcat cgtggagtac aaggattcat gggtggagaa 421 gggttgctat gtttgcatca ttataggata ctgtgaagga ggagacatgg ctgaagctat 481 taaaagagct acaggtgatc atttctctga ggagaagctt tgcaagtggc ttgtgcagct 541 cctcatggcc cttgactatt tgcatgcaaa tcacattctt caccgtgatg tgaagggatc 601 aaagtataag actaggtgac tttgggcttg caaaaatatt gacctctgat gatctagcat 661 cctctgtggt aggaacacca agttatatgt gcccagaact acttgctgat ataccttatg 721 gtaccaaatc tgatatttgg tcactaggat gttgtatata tgaaatgact gctctgaggc 781 ctgcatttaa agcttttgat atgcaagctc ttatcagtaa gatcaccaag tcaattgtgt 841 cgccattgcc aactagatat tctggtgcat ttagaggact tattaagagc atgctacgaa 901 aaagtccaga acacaggcca agtgcagctg aactactcaa gcatccacat ctccaaccct 961 atgtgctgca agtccatttg aaatcttctc ctgctcgcaa cataattcct tcccatcagt 1021 ctccgattga caaggttaag aaaatgacat ttcccactga gtccatgtgc agaagcaagg 1081 gcaggagaaa ctctttgggt aatgagagaa tcgtgacctt cagcagacct tctcctgaaa 1141 ggaagtttac tagttctatt cagagtatca aggattactc aactactcgg agtgtcaaag 1201 atttatctat cgatgttagt ttggtcgagg aggttagtag taaaacaact tttaccacaa 1261 gaacatcgag tattgtgaag actcccaaga gaactccaag caaaacaatc acaactcccc 1321 agttagaacc tccaaaggta tcttacaaca gagtaaatcg gagcgagctg ctttcaagaa 1381 caccggtgaa cagaagcgct cgggtaatcc gcagagcttc cctcccactc ccactgccat 1441 catccgagac accgaagcgc ggcgtcagca gcatcagcat cctcgagcag ctggaatccc 1501 ccgacgtatc cgtgaattcg cctcggatag accggatcgc cgagttcccg ctggcctcat 1561 ccgaagatcc accgttcctc aagctccacg gacgccgctc tccaactcca acgccacagc 1621 attgcgtcat cgaccagtcg atcaccaagg acaaatgcat ggtcgaagcg ttccacatca 1681 tcgacgtcga tgacgacgac gggaggagcg actcgtcgtc gggccgtaac aacgccgcgg 1741 cggctgcctc gagccgcgac ggctcgtcgg agtcgacgag gcagcggcgg ttcgacacgt 1801 cgtcgtacca gcagcgcgcg gaggcgctgg aggggctgct ggagttcagc gcgcagctgc 1861 tgcagcagga gaggtacgac gagctgggcg tcctgctcaa gccattcggc ccggagaagg 1921 tgtccccgag ggagacggcc atctggctca ccaagagctt caaggagaca gggctgtaag 1981 catatgcgat cactctcacc ttgctctaga aaacaaatga gcagaagcaa attaaattgt 2041 agctcaggaa agattagttg ctgacagtgt gacaccatct cagtgttgcc tcccccaact 2101 agcttatgaa agattattca gtgatcatct atggattaac aaggaagtag cggtagttct 2161 atacttctat gtggtgttgg tctgaagcag gaagtagtag tagttcatgt ttctaaccat 2221 gtaggagtac ttgacaggta aactgggcat tccagcccgg ctgaagaatc atccagttga 2281 ttgattttgt ttctgtttga atagcatttc tcttgttcat gtaatcttga gttattgaag 2341 gtttagagag agagagagag agagctgctt gccttgtatt atccaaagta ggaattcaga 2401 caatggccat atctgatgga gacaacaaga agaatttgag gagcttgtac tgtactatgc 2461 acaaagataa cgttcttgtc //