LOCUS AK072528 1881 bp mRNA linear PLN 04-DEC-2008
DEFINITION Oryza sativa Japonica Group cDNA clone:J023131B01, full insert
sequence.
ACCESSION AK072528
VERSION AK072528.1
KEYWORDS CAP trapper; FLI_CDNA.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1881)
AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
Yazaki,J., Yokomizo,S. and Yoshimura,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Department of
Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE 2
AUTHORS The Rice Full-Length cDNA Consortium, National Institute of
Agrobiological Sciences Rice Full-Length cDNA Project Team:,
Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
International Science Genome Sequencing & Analysis Group:,
Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
from japonica Rice
JOURNAL Science 301, 376-379 (2003)
COMMENT This clone is one of the 28K full-length cDNA clones from japonica
rice.
URL : http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
and Yamamoto,M.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1881
/clone="J023131B01"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
misc_feature 1..1881
/db_xref="Osa1:LOC_Os04g42250"
/db_xref="RAP-DB:Os04g0500700"
/note="(RAP Annotation release2) Similar to
Hydroxyanthranilate hydroxycinnamoyltransferase 3"
/note="(Rice Genome Annotation Project) anthranilate
N-benzoyltransferase protein 2, putative, expressed"
/note="mapping to R04-TIGRv4S1-000696F (Chr.4: short
arm=24774908, long arm=24780436, direction=forward) for
TIGR Pseudomol ver4"
BASE COUNT 395 a 518 c 518 g 450 t
ORIGIN
1 gagctgctct ccaccaagag ctgctccgcc cccctacccc gcaacccgtt gctttgtgcc
61 gcgcctcgct ttggtcttca tccgcctcag atctgattcg ttctaggttg gtctggggaa
121 gatggcgatc acggtgaggc ggtcgacgat ggtgcggccg gcgtgggaga cgccgcgggt
181 gcggctgtgg aactcgaacc tcgacctcgt ggtgccgcgg ttccacaccc caagcgtcta
241 cttctaccgc cggggccccg agggaggggg cacgccggag gggttcttcg acggggagcg
301 gatgcggcgc gcgctggcgg aggcgctcgt gccgttctac ccgatggccg ggcggctcgc
361 gcgcgacgag gacgggaggg tcgagatcga ctgcaacggg gaaggggtgc tcttcgtcga
421 ggccgacgcg cccgacgcct ccgtcgatga ctacggcgac ttcgcgccca ccatggagct
481 caagcgcctc atccctgccg ttgattacac cgacgacatc tcctccttct cgctcctcgt
541 gctccaggtg acctacttca agtgcggagg tgtctccctt ggagttggta tgcaacacca
601 tgtggcggat ggcatgtccg gtttgcactt tattaactca tggtctgacc tctgccgagg
661 aactcaaatt gccatcatgc ccttcattga ccgcactctc ctacgagccc gagatccacc
721 aactccatca tacccacatg ttgagtacca gcctgcccca gccatgctgt cctccgtacc
781 ccagtctgtt actgctaata agacaacacc acctccaact gctgtggaca ttttcaagct
841 tacccgctca gaccttggtc gactgcgttc gcagctccca tcaggagaag gtgcaccacg
901 tttcagcaca tatgcagttc ttgctgcaca tgtctggcga tgcgtatctc ttgcacgtgg
961 cctgccttct gaacagccca ctaagctgta ttgtgccact gatgggcgac aacggttgca
1021 gcctccactt ccagaaggtt actttgggaa tgtcattttc accgccactc cacttgctga
1081 ggcaggcaag gtgaccagtg ggctggcaga tggagcagca gtcatccaag aggcgctaga
1141 taggatgaac gatagctact gccgctcagc attggactac ctggagctgc agcctgattt
1201 atcagcattg gtccgtggag cacacacttt ccggtgtccg aacctcgggc tcaccagctg
1261 ggtgcgcttg ccaattcatg atgcagattt tggatgggga agaccagtgt tcatgggtcc
1321 tggtggcatc gcctatgaag ggctggcgtt tgtcctccca agcgcgaaca aggatggtag
1381 cctatccata gccatctcat tgcaggctga gcacatggag aagttcagga agctgatctt
1441 cgaggtgtaa gcagactact tatgttatgt cagggagaag ttgtagagct agagttctca
1501 ggtaaaatac cttcaagtga gtcatggggg ctatgctctt gctcctgttg agcaaattgt
1561 ctggccacgt tctcttgtac cttagcttgc aaggatattt ggccatcacc acagccgtgt
1621 gacgatgtga gcaaccaata atgagctgtt tttttgtttt cgtttaggat aggaatcaac
1681 aatgaagaaa aggtgctgta ttctgtgaaa ctacatggca gtgttgttct taccaaaaat
1741 acatgacaag tgaattgggt caagttattg cctgttgtag ctcaagtcga tagatgaaca
1801 tcattgtaca gtacgaatgt acgatacgac tataacagcc tgattgccta tgaactgcaa
1861 gtaaatgcat gtgaataact g
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