LOCUS       AK071996                1834 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013091F23, full insert
            sequence.
ACCESSION   AK071996
VERSION     AK071996.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1834
                     /clone="J013091F23"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1834
                     /db_xref="Osa1:LOC_Os01g62760"
                     /note="(Rice Genome Annotation Project) protein
                     phosphatase 2C, putative, expressed"
                     /note="mapping to R01-TIGRv4S1-001667F (Chr.1: short
                     arm=36670840, long arm=36672856, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          307 a          536 c          616 g          375 t
ORIGIN      
        1 ggtcgtcgcc tcacctcgcg cctccgctac tactgcttgt ctgctgctgc agctgctgtt
       61 attaccatac cgcgggagaa ggggggccga acccgaaggc gtgcgagagg gaggtgaggt
      121 gaggtggagc cgtggaggcg cttgtttcgc gtgcgagacg gtgcttcgtt tcgcctcacg
      181 ttttccgagg gctacggcga cttggtggga gcgcggagaa aatctagcga gccgtcggag
      241 ttgggtggcg cgcggccggc tgtgcttctg aaggaggagt aattggagta gttgcttgcc
      301 atggccgaga tctgctgcga ggaggccatg tcgccgccgg ccactgccac ggctgctgtc
      361 gcggcagcgg tctccgcctc ggccgccgca gccgtctcct cggcgataga caggcggcgc
      421 cgcaggatgg agatgaggcg catccgcatc gcaagtgatc tcgagctgca ggccggagag
      481 gatgggcgcc ctggaaagcg gcagaggctg gcgcgcacgg cgtctggcgc cccgcgtcct
      541 gacgaggatt cggcgtctga gcggccgagt tgtggccgta cggaggagtt cccgaggtat
      601 ggggtcaccg ctgtgtgcgg ccgccgtcgc gagatggaag acgccgtgtc catcagaccg
      661 gacttcttgc cggcatccgg caagttccat ttttacggcg tcttcgacgg ccatggctgc
      721 tcccatgttg cgacgacgtg ccaggacagg atgcacgaga ttgtcgccga ggagcacaac
      781 aagtgggcct ccggcgaagt ggcgccttgg agggatgtga tggagaagag cttcgcgcgg
      841 atggatgggg aggtcggtaa ccgggcgtcc acccgcagcg acgacgagcc cgcctgcccg
      901 tgcgagcagc agacgccttc gcgtcgcgac cacgcgggtt ccaccgccgt cgtcgccgtc
      961 gttagcccaa cacaggtcgt cgtcgccaac gccggcgact cccgcgccgt catctcccgt
     1021 gccggcgtcc ccgtcgcact atccgttgac cacaaagtac gtatatgctc gcatcacagg
     1081 gccggctgag cctttcccgt ccatctgcaa aaaatcgtta gtttcttgtc catgagcgtg
     1141 tgcctgacat ggttgctact tgctacctcg gaacggttca gcccgatcgg cccgacgagc
     1201 tggaacgaat cgaggcggcg ggcggccgcg tcatttactg ggacggcgcc cgggtgctcg
     1261 gcgtcctcgc catgtctcga gccatcgggg atgggtacct taagccgtac gtgacgtcgg
     1321 agccggaggt gaccgtgacg gagcgcaccg acgacgatga gtgcctgatc ctggccagcg
     1381 acgggctatg ggacgtcgtg accaacgaga tggcgtgtga ggtcgtgagg gcgtgcttcc
     1441 acaacaacgg tccgccggca ccggccgcgc ggccgagcgg cgtgccctcc tcggccgagg
     1501 cggcggaaac cgagaacgga ggagccgcat cggtgaaggg gataagcaag gcggagtcct
     1561 ccgacaaggc gtgctccgac gcggccatgc tgctgacgaa gttggcgctg gcgcggcgga
     1621 gcgcggacaa tgtcagcgtc gtcgtcgtag atctccgccg gggattgtga ttcttggcgc
     1681 aatattctat gctccatgat tgctttcttt cttcttcttt tttttattct aagttaattt
     1741 ttcccttcaa atttcttcct tatttctctg tttagtttta gttttactac tagctcctac
     1801 caagataaat gaatataata gccttttttt tcgc
//