LOCUS AK071996 1834 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013091F23, full insert sequence. ACCESSION AK071996 VERSION AK071996.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1834) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1834 /clone="J013091F23" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1834 /db_xref="Osa1:LOC_Os01g62760" /note="(Rice Genome Annotation Project) protein phosphatase 2C, putative, expressed" /note="mapping to R01-TIGRv4S1-001667F (Chr.1: short arm=36670840, long arm=36672856, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 307 a 536 c 616 g 375 t ORIGIN 1 ggtcgtcgcc tcacctcgcg cctccgctac tactgcttgt ctgctgctgc agctgctgtt 61 attaccatac cgcgggagaa ggggggccga acccgaaggc gtgcgagagg gaggtgaggt 121 gaggtggagc cgtggaggcg cttgtttcgc gtgcgagacg gtgcttcgtt tcgcctcacg 181 ttttccgagg gctacggcga cttggtggga gcgcggagaa aatctagcga gccgtcggag 241 ttgggtggcg cgcggccggc tgtgcttctg aaggaggagt aattggagta gttgcttgcc 301 atggccgaga tctgctgcga ggaggccatg tcgccgccgg ccactgccac ggctgctgtc 361 gcggcagcgg tctccgcctc ggccgccgca gccgtctcct cggcgataga caggcggcgc 421 cgcaggatgg agatgaggcg catccgcatc gcaagtgatc tcgagctgca ggccggagag 481 gatgggcgcc ctggaaagcg gcagaggctg gcgcgcacgg cgtctggcgc cccgcgtcct 541 gacgaggatt cggcgtctga gcggccgagt tgtggccgta cggaggagtt cccgaggtat 601 ggggtcaccg ctgtgtgcgg ccgccgtcgc gagatggaag acgccgtgtc catcagaccg 661 gacttcttgc cggcatccgg caagttccat ttttacggcg tcttcgacgg ccatggctgc 721 tcccatgttg cgacgacgtg ccaggacagg atgcacgaga ttgtcgccga ggagcacaac 781 aagtgggcct ccggcgaagt ggcgccttgg agggatgtga tggagaagag cttcgcgcgg 841 atggatgggg aggtcggtaa ccgggcgtcc acccgcagcg acgacgagcc cgcctgcccg 901 tgcgagcagc agacgccttc gcgtcgcgac cacgcgggtt ccaccgccgt cgtcgccgtc 961 gttagcccaa cacaggtcgt cgtcgccaac gccggcgact cccgcgccgt catctcccgt 1021 gccggcgtcc ccgtcgcact atccgttgac cacaaagtac gtatatgctc gcatcacagg 1081 gccggctgag cctttcccgt ccatctgcaa aaaatcgtta gtttcttgtc catgagcgtg 1141 tgcctgacat ggttgctact tgctacctcg gaacggttca gcccgatcgg cccgacgagc 1201 tggaacgaat cgaggcggcg ggcggccgcg tcatttactg ggacggcgcc cgggtgctcg 1261 gcgtcctcgc catgtctcga gccatcgggg atgggtacct taagccgtac gtgacgtcgg 1321 agccggaggt gaccgtgacg gagcgcaccg acgacgatga gtgcctgatc ctggccagcg 1381 acgggctatg ggacgtcgtg accaacgaga tggcgtgtga ggtcgtgagg gcgtgcttcc 1441 acaacaacgg tccgccggca ccggccgcgc ggccgagcgg cgtgccctcc tcggccgagg 1501 cggcggaaac cgagaacgga ggagccgcat cggtgaaggg gataagcaag gcggagtcct 1561 ccgacaaggc gtgctccgac gcggccatgc tgctgacgaa gttggcgctg gcgcggcgga 1621 gcgcggacaa tgtcagcgtc gtcgtcgtag atctccgccg gggattgtga ttcttggcgc 1681 aatattctat gctccatgat tgctttcttt cttcttcttt tttttattct aagttaattt 1741 ttcccttcaa atttcttcct tatttctctg tttagtttta gttttactac tagctcctac 1801 caagataaat gaatataata gccttttttt tcgc //