LOCUS       AK071893                1792 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013053K07, full insert
            sequence.
ACCESSION   AK071893
VERSION     AK071893.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1792
                     /clone="J013053K07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1792
                     /db_xref="Osa1:LOC_Os05g48200"
                     /note="(Rice Genome Annotation Project) glutamate
                     synthase, chloroplast precursor, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-001052F (Chr.5: short
                     arm=27548502, long arm=27553124, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          505 a          332 c          482 g          473 t
ORIGIN      
        1 tttcataaaa tatgagcgag agggtacttc ttacagagat ccaaatgagc gtgtaaaaga
       61 ttggaatgaa gttgcaattg aattggttcc tgggccactg ctaaagacgc aatctgctcg
      121 gtgcatggat tgtggcactc ctttctgtca tcaggagggt tctggtgctg gttgtcctct
      181 tggaaataag attcctgaat tcaatgaatt ggttcatcag aatagatggc atgaagcctt
      241 ggatcggcta cttgagacaa acaatttccc tgagtttact ggacgagttt gtcctgctcc
      301 ttgtgagggt tcgtgcgtac ttggcattat agacaatcca gtatccataa aaagcataga
      361 gtgcgccatc atagacaaag gatttgaaga gggatggatg gtaccacggc ctccacttcg
      421 gagaacagga aagagagttg ctattgttgg cagtggccca gctggtctag ctgctgcaga
      481 ccaactgaac aaaatgggcc atttcgtgac tgtctttgaa cgtgctgacc gtattggagg
      541 actgatgatg tatggggttc caaatatgaa ggctgacaaa gagggcattg ttcagcgacg
      601 tgtcgagttg atggctaagg agggggttca attcattgtg aatgcccatg ttggaagtga
      661 ccctttatac tccgttgaaa agctccgctc tgagaatgat gccattattt tggcctgtgg
      721 agctacaaag ccaaaagatc tccctattcc tggacgggag ttggcaggca tccatttcgc
      781 tatggaattt cttcatgcca ataccaaaag tttacttgac agcaacttgg aggatggtaa
      841 ctacatatca gcccaaggga gaaaggtggt tgtcattggt ggtggagaca caggcacaga
      901 ttgcattggg acatccatta ggcatggttg caccaacctt gtaaatcttg aacttttgcc
      961 agagccacca agaaagaggg cacctgacaa cccctggccc cagtggccca ggatcttccg
     1021 tgttgattat gggcaccagg aagcaactag caagtttgga aaagatccaa gaagttacaa
     1081 agtcctgacg aagcgattta tcggagatga gaatggaaat gtgaaggccc ttgaggtaat
     1141 acgtgttgaa tggggaaagg tgaacggaag gttccaattc aaggaagttg aaggatcaga
     1201 agaaattatt gaggccgatc ttgtcctctt agctatggga ttcctgggtc ccgaagcgac
     1261 tgttgctaac aagctgggtc tagaacaaga catgaggtca aacttcaaag ctcaatttgg
     1321 aaactttgcg accaatgtgg aaggtgtatt tgctgctgga gactgcagac gtgggcaatc
     1381 actggttgtt tgggccatca cagaggggcg ccaagctgca gcagccgtag acaattacct
     1441 gtcgaaggat gatgaaggtg aaaccaatgg cacagaggac attgctgtct caagtgaagg
     1501 tctggtccaa cccgtagttg cataggccga gagaacattt ctgcaatttt gatacagcat
     1561 tgatgatgcg aagatagtag ggccatgcat tttttagcta taaaaaggta aaataaaggg
     1621 cctgtaaata atttacaaga aaagggggcc cttttgttta tataagtatg ataaaaggga
     1681 aattttgcgg acgcgtatat tttttccctg tttcttcttg tgaagagatg caaatcctgt
     1741 gattataaga gcaatgtctg gtttttgtta aataaatgtg aggggattct gt
//