LOCUS AK071893 1792 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013053K07, full insert sequence. ACCESSION AK071893 VERSION AK071893.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1792) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1792 /clone="J013053K07" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1792 /db_xref="Osa1:LOC_Os05g48200" /note="(Rice Genome Annotation Project) glutamate synthase, chloroplast precursor, putative, expressed" /note="mapping to R05-TIGRv4S1-001052F (Chr.5: short arm=27548502, long arm=27553124, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 505 a 332 c 482 g 473 t ORIGIN 1 tttcataaaa tatgagcgag agggtacttc ttacagagat ccaaatgagc gtgtaaaaga 61 ttggaatgaa gttgcaattg aattggttcc tgggccactg ctaaagacgc aatctgctcg 121 gtgcatggat tgtggcactc ctttctgtca tcaggagggt tctggtgctg gttgtcctct 181 tggaaataag attcctgaat tcaatgaatt ggttcatcag aatagatggc atgaagcctt 241 ggatcggcta cttgagacaa acaatttccc tgagtttact ggacgagttt gtcctgctcc 301 ttgtgagggt tcgtgcgtac ttggcattat agacaatcca gtatccataa aaagcataga 361 gtgcgccatc atagacaaag gatttgaaga gggatggatg gtaccacggc ctccacttcg 421 gagaacagga aagagagttg ctattgttgg cagtggccca gctggtctag ctgctgcaga 481 ccaactgaac aaaatgggcc atttcgtgac tgtctttgaa cgtgctgacc gtattggagg 541 actgatgatg tatggggttc caaatatgaa ggctgacaaa gagggcattg ttcagcgacg 601 tgtcgagttg atggctaagg agggggttca attcattgtg aatgcccatg ttggaagtga 661 ccctttatac tccgttgaaa agctccgctc tgagaatgat gccattattt tggcctgtgg 721 agctacaaag ccaaaagatc tccctattcc tggacgggag ttggcaggca tccatttcgc 781 tatggaattt cttcatgcca ataccaaaag tttacttgac agcaacttgg aggatggtaa 841 ctacatatca gcccaaggga gaaaggtggt tgtcattggt ggtggagaca caggcacaga 901 ttgcattggg acatccatta ggcatggttg caccaacctt gtaaatcttg aacttttgcc 961 agagccacca agaaagaggg cacctgacaa cccctggccc cagtggccca ggatcttccg 1021 tgttgattat gggcaccagg aagcaactag caagtttgga aaagatccaa gaagttacaa 1081 agtcctgacg aagcgattta tcggagatga gaatggaaat gtgaaggccc ttgaggtaat 1141 acgtgttgaa tggggaaagg tgaacggaag gttccaattc aaggaagttg aaggatcaga 1201 agaaattatt gaggccgatc ttgtcctctt agctatggga ttcctgggtc ccgaagcgac 1261 tgttgctaac aagctgggtc tagaacaaga catgaggtca aacttcaaag ctcaatttgg 1321 aaactttgcg accaatgtgg aaggtgtatt tgctgctgga gactgcagac gtgggcaatc 1381 actggttgtt tgggccatca cagaggggcg ccaagctgca gcagccgtag acaattacct 1441 gtcgaaggat gatgaaggtg aaaccaatgg cacagaggac attgctgtct caagtgaagg 1501 tctggtccaa cccgtagttg cataggccga gagaacattt ctgcaatttt gatacagcat 1561 tgatgatgcg aagatagtag ggccatgcat tttttagcta taaaaaggta aaataaaggg 1621 cctgtaaata atttacaaga aaagggggcc cttttgttta tataagtatg ataaaaggga 1681 aattttgcgg acgcgtatat tttttccctg tttcttcttg tgaagagatg caaatcctgt 1741 gattataaga gcaatgtctg gtttttgtta aataaatgtg aggggattct gt //