LOCUS AK071525 1610 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023099K18, full insert sequence. ACCESSION AK071525 VERSION AK071525.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1610) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1610 /clone="J023099K18" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 120..1391 /db_xref="Osa1:LOC_Os01g27880" /db_xref="RAP-DB:Os01g0376700" /note="(RAP Annotation release2) Similar to Sucrose-phosphatase (EC 3.1.3.24)" /note="(Rice Genome Annotation Project) sucrose phosphate synthase, putative, expressed" /note="mapping to R01-TIGRv4S1-000724R (Chr.1: short arm=15895753, long arm=15900213, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG92541.1" /translation="MDKLSGSARLIIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQ DSLLVFSTGRSPTLYKELRKEKPMLTPDITIMSVGTEITYGEAMVPDDGWEEYLNNKW DRNVVVEETAKFSELKLQPETEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKII YSGGQDLDILPQGAGKGQALAYLLKKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGV MVSNAQEELLQWYAENAKGNPKIIHATERCAAGIIEAIGHFKLGPSVSPRDVGFPYVK EDHIKPTDAVVKFYVLYEKWRRAEVPKSDSVVQYFKNITHANGVIIQPSGLECSLHAS VDALSSCYGEKQGKKYRTWVDRLFVSQSGSDSWLVRFDLWEAEGDARLCCLTSLALNV KPETPAGFLITHVHKTWLKGYSSADEQSSKL" BASE COUNT 440 a 329 c 392 g 449 t ORIGIN 1 ggtctcttct cccgactcct gagagaagaa gaaccgctgc ttctccaccc gtcgcggagc 61 cccgtgtcca tcctccggcg cggcggccgc cccccagcga tccgcctcag gttgctaaaa 121 tggataagct cagtggttct gcacgtctta ttatcgtttc agatcttgac cacacgatgg 181 ttgatcatca cgatgaggag aacttatcct tgcttagatt tggcgccctg tgggagtccg 241 tttactgtca ggattctcta ctagtatttt caactggaag atcccctact ctttataagg 301 aattgaggaa agagaagcct atgctaactc cagacatcac tatcatgtct gtggggactg 361 agataacata tggtgaggca atggttcctg atgatggttg ggaggaatat ctgaacaata 421 agtgggacag gaatgtagtt gtggaggaga cagctaagtt ttctgagctg aagcttcagc 481 cagagacaga acagcgtcca cataaggtca gcttttttgt tgataaaaag agtgctcagg 541 aagtgataaa gtctctctcc ggtaatatgg agaaatgcgg gcttgatgtt aaaataatct 601 acagtggtgg ccaagacctt gacatattac ctcagggcgc tgggaagggt caagcacttg 661 catatttgct taagaagtta agctcctgtg gaaaaccacc aaacaatact cttgtttgtg 721 gggactctgg taatgatgca gaattattta gcatccctgg tgtacatggt gtcatggtta 781 gcaatgccca agaggaattg cttcagtggt atgcagaaaa tgcgaagggt aaccctaaaa 841 ttattcatgc aactgagagg tgcgccgctg gtattatcga agctattgga cacttcaaac 901 taggacctag tgtttctcca agagatgtgg ggtttcctta tgttaaggag gaccatatca 961 aacctacaga tgctgttgta aagttttacg ttctctatga gaagtggcgc agggctgagg 1021 ttccaaaatc agattcagtt gtacagtact tcaaaaatat cactcatgca aatggtgtta 1081 tcattcaacc ttctgggctt gaatgttctc tccatgcctc tgttgatgca ttgagttcat 1141 gttatggtga gaaacaaggg aaaaaatacc gaacatgggt ggacagacta tttgtctcac 1201 agtctggttc agacagttgg ctggtcagat ttgacttgtg ggaggcagaa ggtgatgcgc 1261 ggttgtgctg tttgacaagt cttgcgctga atgtaaagcc tgaaacccct gctggcttcc 1321 tgataacaca tgtacacaaa acatggctca aaggatactc ttcagcggat gagcagtcct 1381 ccaagcttta aacccttttt cacccctgtg cacacggaat gaatttactt gatgataaat 1441 gaaggacctg ctcgtctgag aatctcattt tcttatttaa tgtaatataa atgatctgtc 1501 tcgtgactcg tgcgatgata aagtgaacga tctcagaagg caacttcaac aaatgttgga 1561 tatgatttta cagagagttc agaattagat ttcatgacac aagtaccgct //