LOCUS AK070944 2331 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023066C07, full insert sequence. ACCESSION AK070944 VERSION AK070944.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2331) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2331 /clone="J023066C07" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2331 /db_xref="Osa1:LOC_Os09g36670" /note="(Rice Genome Annotation Project) peptidyl-prolyl cis-trans isomerase CYP19-4 precursor, putative, expressed" /note="mapping to R09-TIGRv4S1-000708F (Chr.9: short arm=21151300, long arm=21153876, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 573 a 455 c 546 g 757 t ORIGIN 1 ggtcatctgc ttcgtcgccg atctcgtctc cgccgcccgc gagcgaatcg cccccaaatc 61 gggagggcgg ctgctctcgc ctgcagattt gcgccgtcgt tgcggcgaat tgatgaggta 121 gaagtgtcca actactcgcc cctggttcgc gatgctgcgg aaggtggccg tcgccttcct 181 cgcttgcgcc gccctctacc tcgccttcgc cgcctactcc cgccgcgagg tatgatgggc 241 tttctcttac agttggggac ggatttgttc gattcggttg atcagtgacc taccgcgcgg 301 caattcttgg cttcgtaggt agtggcaacg gagtggaatt agactggatc tttctgttcc 361 actgttgatt tgttctacat gatgcagttg ggttttagct gctcgcacct acagttctgc 421 aatgtgatgt ctgcaattag tatgctcgtg ttgcgctgct cgagatgctt cagtagctag 481 acgatattgt ttactagtag gattgtagag aacaccatcc ccataaatcg tttaggggga 541 gacttttttc tcaccgggcc agaagggaaa gacttaaagc aaggaataca tatatatgcg 601 agttgctggc atctgactgc acaatgattt ctgttttgct gacaacagta gccttattgt 661 acaatgagtt gaacctcatg actatggcca tcactccttg tctcaagatt agaacatggt 721 gtttagattc tgaaaaatat atagacgtgg ggcgctcgtt tcattttgtg gacgatctgg 781 agataggttc tggcctcggt tatggtggta gtgactagtg agacgatgat tcaatgttac 841 agaatattta ttcttctttc tcaccttgta cagagccttg gagaggttcg attacctgca 901 gttactaaca gggtatactt ggatgtggaa attgatgggc aacatatagg tatatcacta 961 tatcatcatg acaatctgtc ttggatgttc caatggaaag aataaaactt gttgcttgca 1021 ccgttactat acatgtcact cagcttaagc cctggttaac ctaattcttg tgtgctcccc 1081 tcattacagg tagaattgtc attggccttt atggagatgt tgtgccaaaa acagttggta 1141 atcttacgcc cattcttttc ttcatcatat ttatttacaa acttgagatt aatcctttgg 1201 agacagtggc atagcagatt gtggaattct tatgttttgt ttgtgtggac aataaatctc 1261 cccttgaaga tactttgatt atcatttgta gcatatagtt tgtcccattt gtttgctact 1321 gtaatataaa ttggcaataa tagcttgttg attttttatt tctcattttg cagcaaattt 1381 tagggctctt tgtacaggta tttcttcttc ctagatctat tcctgttaca gctgaaattc 1441 aaccttctgt tcacatgatt atccatattg cactctgttc actattgcag gagaagaggg 1501 cattgggcac aagggtaaat ctcttcacta taaaggatca agatttcatc gtattatccc 1561 aggcttcatg attcagggtg gggacatagt tagaggtgat ggaaaaggaa gtgagtctat 1621 atatgggggc accttcccag atgagaattt catagtaaaa catacacatc caggtgttat 1681 tgccatggca aattctggac ctgattccaa tggatcgcag ttttacatta ccacaatcaa 1741 gacaagctgg ttggatgggg agcatgttgt gtttggcagg gtgattcagg gaatggatta 1801 tgtgtacgcc attgaagggg gtgctggaac ttacaatggc aagcctagga agaaagttgt 1861 aatcaccgac tctggtgaga taccgaagga gaaatgggct gaagaagtgt aggctgtttt 1921 gtactttggt ttgccctgta ctttttgggc agcaggtgca gttttacatt accacaaatc 1981 aggcaaggcg tctaaaatgt tgtacattgt agttagttca tactcaatcg aatcccactt 2041 gctgacactg attactcagt gaattctgca ctgtgatgaa gatgaacaca catattctca 2101 gtttctcatg atggtttagc aaggtagaac tgtcttttgt aatgcttcat ttttttaagg 2161 caatctgcaa tgctttgttt ggtattgcag tggtttataa ctatccctgt aaatttctat 2221 ttttgatgaa aatagttagt gctgttattt ttgggaacta attacaatgc acaatactgg 2281 ttggcctact cggatcaatt tatgaaaata tgcacgtgta tgttgttgtc g //