LOCUS AK070801 2594 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023072A11, full insert sequence. ACCESSION AK070801 VERSION AK070801.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2594) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2594 /clone="J023072A11" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 77..2290 /db_xref="Osa1:LOC_Os04g50820" /db_xref="RAP-DB:Os04g0594800" /note="(RAP Annotation release2) Oligopeptide transporter OPT superfamily protein" /note="(Rice Genome Annotation Project) oligopeptide transporter 4, putative, expressed" /note="mapping to R04-TIGRv4S1-000951F (Chr.4: short arm=29843342, long arm=29846484, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG92149.1" /translation="MEIEHLGARAAAAAGEDDQSPVEQVRLTVPTTDDPSLPVWTFRM WTIGLLSCAMLSYINQFFSYRSEPIVITQITVQVAALPIGHFLARVLPKRKFTVFGRE CSLNPGPFNVKEHVLISIFANAGAAFGNGGAYAIDIINIIKAFYHRSISFPTSLLLVI TTQVLGYGWAGLMRKYVVEPAHMWWPQSLVQVSLLRALHEKENLRMTRAKFFLIALIC SAAWYVVPGYLFPTVGAVSWLCWAFPRSVTMQQIGSGMSGLGVGAFTLDWATVVSFLG SPLVYPFFAIVNVWVGFVLLVYVMLPIAYWVLNLYQASTFPFFSASLFDHTGEEYRIS EIVNDRFELDTDAYARQGKIHLSLFFATSYGLGFATIAATLSHVTLFYGTEMYRRFRQ AARENPDVHTRLMRRYDDIPNWWFYGMLALAMVAALLLCTVFKDEVQLPWWALLCAVA VAAFFTLPISVITATTNTTPGLNIITEYVMGLIMPGKPIANVCFKVYGYISMNQAVSF LTDFKLGHYMKIPPRSMFLVQFIGTIVAGTVNMSVAWWLLSTVPHICDKKHLPEGSPW TCPGSRVFFDASVIWGLVGPRRIFGPLGYYGALNWFFLGGLAGPAVVWLLARALPRHA GWIRLIHLPVLLGATANMPPASTLNYTAWCSVGAVFNYLVFRRRKAWWQRYNYVLSAA MDAGVAIMGVLIYFCLSSRGITPDWWGNSDINIDHCDLSTCPTAKGVIVEGCPVF" BASE COUNT 443 a 809 c 762 g 580 t ORIGIN 1 tgccagcaat tccgtcactt tgacagatta ttctgaagcg cgaggttttg caggcgcctc 61 ctcgcgcggg gtagcaatgg agattgagca tctcggcgcc cgcgcggccg ccgccgccgg 121 cgaggatgac cagtcgccgg tggagcaggt ccggctgacc gtgccgacga ccgacgaccc 181 gtctctgccg gtatggacgt tccggatgtg gaccatcggg ctcctctcct gcgccatgct 241 ctcctacatc aaccagttct tctcctaccg ctctgagccc atcgtcatca cccagatcac 301 tgtccaggtg gcggcgctgc caatagggca cttcttggca cgcgtgctgc cgaagaggaa 361 gttcacggtg ttcgggcggg agtgctcgct gaaccctggg ccattcaacg tgaaggagca 421 cgtcctgata tccatcttcg ccaacgccgg cgccgcgttc ggcaacggcg gcgcctacgc 481 catcgacatc atcaacatca tcaaggcgtt ctaccaccgc agcatctcct ttcccaccag 541 cctcctcctc gtcatcacca cccaggtgtt gggctacgga tgggcagggc tgatgaggaa 601 gtacgtggtg gagccggcgc acatgtggtg gccgcagagt ctcgtgcagg tttccctcct 661 gagggcgttg cacgagaagg agaacctgcg gatgacgcgg gccaagttct tcctgatcgc 721 gctgatctgc agcgcggcgt ggtacgtggt gccgggctac ctgttcccga ccgtgggcgc 781 ggtgtcgtgg ctgtgctggg cgttcccgag gtcggtgacg atgcagcaga tcgggtccgg 841 catgagcggc ctcggcgtcg gcgccttcac gctcgactgg gccaccgtcg tctccttcct 901 gggcagcccg ctcgtgtacc cgttcttcgc catcgtcaac gtctgggtcg gcttcgtgct 961 cctcgtctac gtcatgctgc ccatcgccta ctgggtgctc aacctgtacc aggccagcac 1021 gttccccttt ttctccgcga gcctgttcga ccacaccggc gaggagtaca ggatctcgga 1081 gatcgtcaac gacaggttcg agctcgacac ggacgcctac gcgcggcagg ggaagatcca 1141 cctcagcctc ttcttcgcca cctcctacgg cctcggcttc gccaccatcg ccgccaccct 1201 gtcccacgtc acgctcttct atggaacgga gatgtatcgc aggttccggc aggcggccag 1261 ggagaacccg gacgtgcaca cgaggctgat gaggaggtac gatgacatcc ccaactggtg 1321 gttctacggc atgctcgcgt tggccatggt ggcggcgctg ttgctctgca ccgtgttcaa 1381 ggacgaggtg cagctgccgt ggtgggcgct actctgcgcc gtggccgtgg ccgccttctt 1441 cacgctcccc atcagtgtta tcaccgccac cacaaacacg accccagggt tgaacatcat 1501 cacggagtat gtgatggggc tgatcatgcc ggggaagccg atagccaacg tgtgcttcaa 1561 ggtgtatggt tacatcagca tgaaccaggc cgtctccttc ctcactgact tcaaactcgg 1621 ccactacatg aagattcctc caagatccat gtttctagtc cagttcatcg ggacgatcgt 1681 ggcggggacg gtgaacatgt cggtggcgtg gtggctgctg tcgacggtgc cgcacatctg 1741 cgacaagaag cacctcccgg aggggagccc gtggacgtgc ccgggctccc gcgtgttctt 1801 cgacgcgtcg gtgatctggg gactggtcgg gcctcgccgg atcttcggcc cgctcggcta 1861 ctacggcgcg ctcaactggt tcttcctcgg cgggctggca gggccggcgg tggtgtggct 1921 gctggcgagg gcgctgccgc ggcacgccgg ctggatcagg ctcatccacc tccccgtgct 1981 cctcggcgcc accgccaaca tgccgccggc gtcgacgctc aactacacgg cgtggtgctc 2041 cgtcggcgcc gtgttcaact acctggtgtt ccgccgccgc aaggcgtggt ggcagcggta 2101 caactacgtg ctgtcggcgg cgatggacgc cggcgtggcc atcatgggcg tgctcatcta 2161 cttctgcctg tccagccgcg gcatcacccc agactggtgg ggcaacagcg acatcaacat 2221 cgaccactgc gacctctcca cctgccccac cgccaagggc gtcattgtgg agggatgtcc 2281 cgtcttctga tcgatcatcc atccaatata catatttccc ccgtagatgt gttcttcgtg 2341 cgaaactaga tcagtaaaat caatcagaat ctgaatctct actcgtttaa tatggcagga 2401 ctgatgctgt tcttatttaa agttgtatat atcatttggg tttttaggtt tccaaatgct 2461 cttctttttc gtgttttaac caagttcagt gagctcagtt acccagttag tatattatag 2521 aattggtttc gctccaatgg agttttattg ctgtgtttta attgagttca atgagatata 2581 tattggttaa gtcc //