LOCUS       AK070485                2257 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023049P18, full insert
            sequence.
ACCESSION   AK070485
VERSION     AK070485.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2257
                     /clone="J023049P18"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2257
                     /db_xref="Osa1:LOC_Os05g48200"
                     /db_xref="RAP-DB:Os05g0555600"
                     /note="(RAP Annotation release2) Similar to NADH
                     dependent Glutamate Synthase precursor (EC 1.4.1.14)"
                     /note="(Rice Genome Annotation Project) glutamate
                     synthase, chloroplast precursor, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-001052F (Chr.5: short
                     arm=27547940, long arm=27553180, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          668 a          407 c          587 g          595 t
ORIGIN      
        1 ttgcttatgt ttatgatgtg gatgggaagt tcagtagccg ttgcaactat gagctagttg
       61 acttgtatgc tgtagttgaa gaggatgaca tcacaacatt gagaatgatg atacaacagc
      121 acagacttca tacacaaagt gatttggcca gagatatact cttgaatttt gatactctcc
      181 tcccaaaatt tataaaagta tatccaaggg attacaagcg ggttttggat aaactaaaag
      241 aagagaaggc tgctaaagaa gcagagcaaa aggcaagaga agtggtggat aagaagccag
      301 ttgaagtaat tcaagctcca aatggcattt cagtaaagac agagaaagta atgaacgaag
      361 agccatcaag ccgaccatca cgagtttcaa atgctgtaaa gtaccgaggt ttcataaaat
      421 atgagcgaga gggtacttct tacagagatc caaatgagcg tgtaaaagat tggaatgaag
      481 ttgcaattga attggttcct gggccactgc taaagacgca atctgctcgg tgcatggatt
      541 gtggcactcc tttctgtcat caggagggtt ctggtgctgg ttgtcctctt ggaaataaga
      601 ttcctgaatt caatgaattg gttcatcaga atagatggca tgaagccttg gatcggctac
      661 ttgagacaaa caatttccct gagtttactg gacgagtttg tcctgctcct tgtgagggtt
      721 cgtgcgtact tggcattata gacaatccag tatccataaa aagcatagag tgcgccatca
      781 tagacaaagg atttgaagag ggatggatgg taccacggcc tccacttcgg agaacaggaa
      841 agagagttgc tattgttggc agtggcccag ctggtctagc tgctgcagac caactgaaca
      901 aaatgggcca tttcgtgact gtctttgaac gtgctgaccg tattggagga ctgatgatgt
      961 atggggttcc aaatatgaag gctgacaaag agggcattgt tcagcgacgt gtcgagttga
     1021 tggctaagga gggggttcaa ttcattgtga atgcccatgt tggaagtgac cctttatact
     1081 ccgttgaaaa gctccgctct gagaatgatg ccattatttt ggcctgtgga gctacaaagc
     1141 caaaagatct ccctattcct ggacgggagt tggcaggcat ccatttcgct atggaatttc
     1201 ttcatgccaa taccaaaagt ttacttgaca gcaacttgga ggatggtaac tacatatcag
     1261 cccaagggag aaaggtggtt gtcattggtg gtggagacac aggcacagat tgcattggga
     1321 catccattag gcatggttgc accaaccttg taaatcttga acttttgcca gagccaccaa
     1381 gaaagagggc acctgacaac ccctggcccc agtggcccag gatcttccgt gttgattatg
     1441 ggcaccagga agcaactagc aagtttggaa aagatccaag aagttacaaa gtcctgacga
     1501 agcgatttat cggagatgag aatggaaatg tgaaggccct tgaggtaata cgtgttgaat
     1561 ggggaaaggt gaacggaagg ttccaattca aggaagttga aggatcagaa gaaattattg
     1621 aggccgatct tgtcctctta gctatgggat tcctgggtcc cgaagcgact gttgctaaca
     1681 agctgggtct agaacaagac atgaggtcaa acttcaaagc tcaatttgga aactttgcga
     1741 ccaatgtgga aggtgtattt gctgctggag actgcagacg tgggcaatca ctggttgttt
     1801 gggccatcac agaggggcgc caagctgcag cagccgtaga caattacctg tcgaaggatg
     1861 atgaaggtga aaccaatggc acagaggaca ttgctgtctc aagtgaaggt ctggtccaac
     1921 ccgtagttgc ataggccgag agaacatttc tgcaattttg atacagcatt gatgatgcga
     1981 agatagtagg gccatgcatt ttttagctat aaaaaggtaa aataaagggc ctgtaaataa
     2041 tttacaagaa aagggggccc ttttgtttat ataagtatga taaaagggaa attttgcggg
     2101 cgcgcatatt ttttccctgt ttcttcttgt gaagagatgc aaatcctgtg attataagag
     2161 caatgtctgg tttttgttaa ataaatgtga ggggattctg ttaaaaacat ctatttatta
     2221 tgtgtaagta cataatggat cttcgtgttt ctcttcc
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