LOCUS AK070485 2257 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023049P18, full insert sequence. ACCESSION AK070485 VERSION AK070485.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2257) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2257 /clone="J023049P18" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2257 /db_xref="Osa1:LOC_Os05g48200" /db_xref="RAP-DB:Os05g0555600" /note="(RAP Annotation release2) Similar to NADH dependent Glutamate Synthase precursor (EC 1.4.1.14)" /note="(Rice Genome Annotation Project) glutamate synthase, chloroplast precursor, putative, expressed" /note="mapping to R05-TIGRv4S1-001052F (Chr.5: short arm=27547940, long arm=27553180, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 668 a 407 c 587 g 595 t ORIGIN 1 ttgcttatgt ttatgatgtg gatgggaagt tcagtagccg ttgcaactat gagctagttg 61 acttgtatgc tgtagttgaa gaggatgaca tcacaacatt gagaatgatg atacaacagc 121 acagacttca tacacaaagt gatttggcca gagatatact cttgaatttt gatactctcc 181 tcccaaaatt tataaaagta tatccaaggg attacaagcg ggttttggat aaactaaaag 241 aagagaaggc tgctaaagaa gcagagcaaa aggcaagaga agtggtggat aagaagccag 301 ttgaagtaat tcaagctcca aatggcattt cagtaaagac agagaaagta atgaacgaag 361 agccatcaag ccgaccatca cgagtttcaa atgctgtaaa gtaccgaggt ttcataaaat 421 atgagcgaga gggtacttct tacagagatc caaatgagcg tgtaaaagat tggaatgaag 481 ttgcaattga attggttcct gggccactgc taaagacgca atctgctcgg tgcatggatt 541 gtggcactcc tttctgtcat caggagggtt ctggtgctgg ttgtcctctt ggaaataaga 601 ttcctgaatt caatgaattg gttcatcaga atagatggca tgaagccttg gatcggctac 661 ttgagacaaa caatttccct gagtttactg gacgagtttg tcctgctcct tgtgagggtt 721 cgtgcgtact tggcattata gacaatccag tatccataaa aagcatagag tgcgccatca 781 tagacaaagg atttgaagag ggatggatgg taccacggcc tccacttcgg agaacaggaa 841 agagagttgc tattgttggc agtggcccag ctggtctagc tgctgcagac caactgaaca 901 aaatgggcca tttcgtgact gtctttgaac gtgctgaccg tattggagga ctgatgatgt 961 atggggttcc aaatatgaag gctgacaaag agggcattgt tcagcgacgt gtcgagttga 1021 tggctaagga gggggttcaa ttcattgtga atgcccatgt tggaagtgac cctttatact 1081 ccgttgaaaa gctccgctct gagaatgatg ccattatttt ggcctgtgga gctacaaagc 1141 caaaagatct ccctattcct ggacgggagt tggcaggcat ccatttcgct atggaatttc 1201 ttcatgccaa taccaaaagt ttacttgaca gcaacttgga ggatggtaac tacatatcag 1261 cccaagggag aaaggtggtt gtcattggtg gtggagacac aggcacagat tgcattggga 1321 catccattag gcatggttgc accaaccttg taaatcttga acttttgcca gagccaccaa 1381 gaaagagggc acctgacaac ccctggcccc agtggcccag gatcttccgt gttgattatg 1441 ggcaccagga agcaactagc aagtttggaa aagatccaag aagttacaaa gtcctgacga 1501 agcgatttat cggagatgag aatggaaatg tgaaggccct tgaggtaata cgtgttgaat 1561 ggggaaaggt gaacggaagg ttccaattca aggaagttga aggatcagaa gaaattattg 1621 aggccgatct tgtcctctta gctatgggat tcctgggtcc cgaagcgact gttgctaaca 1681 agctgggtct agaacaagac atgaggtcaa acttcaaagc tcaatttgga aactttgcga 1741 ccaatgtgga aggtgtattt gctgctggag actgcagacg tgggcaatca ctggttgttt 1801 gggccatcac agaggggcgc caagctgcag cagccgtaga caattacctg tcgaaggatg 1861 atgaaggtga aaccaatggc acagaggaca ttgctgtctc aagtgaaggt ctggtccaac 1921 ccgtagttgc ataggccgag agaacatttc tgcaattttg atacagcatt gatgatgcga 1981 agatagtagg gccatgcatt ttttagctat aaaaaggtaa aataaagggc ctgtaaataa 2041 tttacaagaa aagggggccc ttttgtttat ataagtatga taaaagggaa attttgcggg 2101 cgcgcatatt ttttccctgt ttcttcttgt gaagagatgc aaatcctgtg attataagag 2161 caatgtctgg tttttgttaa ataaatgtga ggggattctg ttaaaaacat ctatttatta 2221 tgtgtaagta cataatggat cttcgtgttt ctcttcc //