LOCUS       AK069851                1633 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023034D16, full insert
            sequence.
ACCESSION   AK069851
VERSION     AK069851.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1633
                     /clone="J023034D16"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1633
                     /db_xref="Osa1:LOC_Os06g37450"
                     /db_xref="RAP-DB:Os06g0571800"
                     /note="(RAP Annotation release2) Similar to GATA
                     transcription factor 3 (AtGATA-3)"
                     /note="(Rice Genome Annotation Project) GATA zinc finger
                     family protein, expressed"
                     /note="mapping to R06-TIGRv4S1-000721F (Chr.6: short
                     arm=22154056, long arm=22156044, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          355 a          479 c          469 g          330 t
ORIGIN      
        1 gaatcgtgct ggacctcgca aaattgcccc tccaaccgca tcaacactcg tcgcgcgaag
       61 cgtaccatcg tctctctcat cttcctcgcg gtctcatcct gatcgatctc tgcgagttta
      121 tccaatatct gtactcgcaa actagctaga gagatctagt tagtagctag gcagttgctg
      181 cctctcatgt ctaccatcta catgagtcag ctctcagctg ctctccctct catggagggg
      241 gagcaccacc atcaccacca ggatcatcac caaggccact tccaagcctt ctccctgcag
      301 cctaaggatc ccccagtctt attccccttt gtgatcagta gaagaagcag cagcagcagc
      361 cctagcgaca gcaccactct aagctatggt tcagaccatc acttgacaca gcagcagcag
      421 catcagcatc aagccatgct tgagccccaa aatatgattg gaggatcatc cgctggcatc
      481 tttgcgacgc cgttcccgac cgtcaagagc atccgcgacg acatgatcga gcggtcgcag
      541 ttcgatccat acgataccga gaagctgcag gcgagctgcg ggttagccaa ggtcgtcgcc
      601 ggcggcaagt ggagcgcggt gccagcggcc aagatgaaga tcacgaggaa gatgggtgag
      661 ccgtcgtccg gtgtcactgg cggggctgcg acgacggtgg cgccgaagaa gccgaggagg
      721 aggccggcgc aggcgtacga ggatcacggc catggcggcg ccatgggcca agcttttggc
      781 gtgattaggg tgtgctccga ctgcaacacc accaagactc ccttgtggag gagtggcccg
      841 tgcggcccca agtcgctttg caacgcgtgc ggcatcaggc agaggaaggc gcggcgggcg
      901 atgatggcct ccggactacc agcgtccccc aacgccgccg gccccaaggc ggccgcacat
      961 agcggcgcca caaacgcagc cgccgcagct gccatggagg agacggccga gtccgccacc
     1021 gtcgccccgc ccccggcgcc gacgacgagg ggtggtactc tcgtcgacag catcgggctc
     1081 agctggagca agacccatgc cgccgccacc gcctcctgca gcttccggcc gtcaccggtg
     1141 gctcccggct tcgcggcggc ggtgcaggac gagatcactg acgccgccat gctgctcatg
     1201 acgctgtcct gcgggcttgt ccggagctga gaaagaaaag ctatacttca tctctgcatg
     1261 catccatcga tcgatcgatt ggcaccaagc tagagagacc aatcgatgga gatggagaga
     1321 ggtgcaggct ttttgcagct agtgcgttag cctgttcttg ctcgctcgat cgatcgtaca
     1381 ctgcccccca gttggaatgt ctcttggcgt cttgtttcct gttcgagtct tgtgatctct
     1441 gttactttgt gcactgtact agagagtgag agagagagtg aggtagaaac atcaagagga
     1501 gattagagga gaaagaataa ttaagagaaa agtgtgagct agctaggtaa gatttactgt
     1561 actgtgagtt caatttggag taagcttttt gggctgcttc acggctaatt atgccactgg
     1621 ctgctatata tgt
//