LOCUS AK069851 1633 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023034D16, full insert sequence. ACCESSION AK069851 VERSION AK069851.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1633) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1633 /clone="J023034D16" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1633 /db_xref="Osa1:LOC_Os06g37450" /db_xref="RAP-DB:Os06g0571800" /note="(RAP Annotation release2) Similar to GATA transcription factor 3 (AtGATA-3)" /note="(Rice Genome Annotation Project) GATA zinc finger family protein, expressed" /note="mapping to R06-TIGRv4S1-000721F (Chr.6: short arm=22154056, long arm=22156044, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 355 a 479 c 469 g 330 t ORIGIN 1 gaatcgtgct ggacctcgca aaattgcccc tccaaccgca tcaacactcg tcgcgcgaag 61 cgtaccatcg tctctctcat cttcctcgcg gtctcatcct gatcgatctc tgcgagttta 121 tccaatatct gtactcgcaa actagctaga gagatctagt tagtagctag gcagttgctg 181 cctctcatgt ctaccatcta catgagtcag ctctcagctg ctctccctct catggagggg 241 gagcaccacc atcaccacca ggatcatcac caaggccact tccaagcctt ctccctgcag 301 cctaaggatc ccccagtctt attccccttt gtgatcagta gaagaagcag cagcagcagc 361 cctagcgaca gcaccactct aagctatggt tcagaccatc acttgacaca gcagcagcag 421 catcagcatc aagccatgct tgagccccaa aatatgattg gaggatcatc cgctggcatc 481 tttgcgacgc cgttcccgac cgtcaagagc atccgcgacg acatgatcga gcggtcgcag 541 ttcgatccat acgataccga gaagctgcag gcgagctgcg ggttagccaa ggtcgtcgcc 601 ggcggcaagt ggagcgcggt gccagcggcc aagatgaaga tcacgaggaa gatgggtgag 661 ccgtcgtccg gtgtcactgg cggggctgcg acgacggtgg cgccgaagaa gccgaggagg 721 aggccggcgc aggcgtacga ggatcacggc catggcggcg ccatgggcca agcttttggc 781 gtgattaggg tgtgctccga ctgcaacacc accaagactc ccttgtggag gagtggcccg 841 tgcggcccca agtcgctttg caacgcgtgc ggcatcaggc agaggaaggc gcggcgggcg 901 atgatggcct ccggactacc agcgtccccc aacgccgccg gccccaaggc ggccgcacat 961 agcggcgcca caaacgcagc cgccgcagct gccatggagg agacggccga gtccgccacc 1021 gtcgccccgc ccccggcgcc gacgacgagg ggtggtactc tcgtcgacag catcgggctc 1081 agctggagca agacccatgc cgccgccacc gcctcctgca gcttccggcc gtcaccggtg 1141 gctcccggct tcgcggcggc ggtgcaggac gagatcactg acgccgccat gctgctcatg 1201 acgctgtcct gcgggcttgt ccggagctga gaaagaaaag ctatacttca tctctgcatg 1261 catccatcga tcgatcgatt ggcaccaagc tagagagacc aatcgatgga gatggagaga 1321 ggtgcaggct ttttgcagct agtgcgttag cctgttcttg ctcgctcgat cgatcgtaca 1381 ctgcccccca gttggaatgt ctcttggcgt cttgtttcct gttcgagtct tgtgatctct 1441 gttactttgt gcactgtact agagagtgag agagagagtg aggtagaaac atcaagagga 1501 gattagagga gaaagaataa ttaagagaaa agtgtgagct agctaggtaa gatttactgt 1561 actgtgagtt caatttggag taagcttttt gggctgcttc acggctaatt atgccactgg 1621 ctgctatata tgt //