LOCUS       AK069824                1507 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023026A06, full insert
            sequence.
ACCESSION   AK069824
VERSION     AK069824.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1507
                     /clone="J023026A06"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1507
                     /db_xref="Osa1:LOC_Os05g01460"
                     /db_xref="RAP-DB:Os05g0104900"
                     /note="(RAP Annotation release2) Similar to Clone ZZD1296
                     mRNA sequence"
                     /note="(Rice Genome Annotation Project) STIP1 homology
                     and U box-containing protein 1, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000020R (Chr.5: short
                     arm=241785, long arm=244365, direction=reverse) for TIGR
                     Pseudomol ver4"
BASE COUNT          422 a          318 c          346 g          421 t
ORIGIN      
        1 gtgtgttcaa accgaagcaa aacgggaagg aaaaccaacc aaatccaaga agctgcttct
       61 atggcgacgg cggcggatgg cgtggcggta gcgaggcaag cggagctccg gcggatcgag
      121 ggcaactcct gcttcaacaa ggcccgcctc ggcgccgcca tcgactgcta caccgaggct
      181 atcgctcttt gccccgacgt cgccgtctac tggctcaacc ggggcctctg ccatttcaag
      241 cgcaaggaat gggctaaggt cgaagaggat agcaggagag ctcttgccct tgatgacact
      301 ctggtcaagg taacatcatc tcaatgtccc ttgttcatac ataaatcaag tgattgttac
      361 aggtcttcaa ctttggtcca gggtcactat ttgctgggat gtgccatgct tgagaaggaa
      421 caatgtgctc ttgctatcaa ggaattcaac aaggctttgg atcttcttaa gtcttcgaat
      481 ttgggggaca aaatggcgga ggacatttgg caggttcttg cgaaggcaaa ataccaagat
      541 tgggaaatac actccactaa gagagtttgg aagatgcaaa gtttaaagta tgttatgcat
      601 gaaaaataat tgcaataata atgttccata attgtgttgc agattaactg tagtgtgaat
      661 cttgggtatt ggtggccaat ttactcctat aacaacctgg acactccctt tattatctaa
      721 aatttatgat gctttaaact ttctaacacc actgtgtcac atggacaatt agggaagcat
      781 gtgaaaatgc tttgcaggag caccactttc ttagtggcac acttgtggga gatggctcaa
      841 ccaatgagta tacagaccaa ctgaaattgt tatcagaagt cttcaccaaa gctacaatcg
      901 acgatacacc aacagatgta atattattat ctatgttatc tcatgttcaa catctttgtg
      961 ctagcatatt ttttttctct gtgatcttag gctgttgcta cctgaaaatc taggtgcctg
     1021 actacctttg ctgccaaata acctttgaga tttttagaga tccagtgatc acacccagtg
     1081 gtataacgta tgagaggtcc ataatccttg aacatctttg caaggtgggc aatttcgacc
     1141 cggtgacacg agagcctctg aaagagcatc aattggttcc taacctggct ataaaggaag
     1201 cagtccaagc ctacctcaag aatcacagtt gggcctacaa gttgaactga tgatgttgct
     1261 ctgtagttgc ttagtgctaa caacaggtgt tgataaaatg ttgggttgtc aagggggaat
     1321 tctttgcttt tctgatgtaa tgtataagca agttcattcg tgccctcatg gaattgattg
     1381 attcttgggc aacttctgac gaaccttgga caattgtaca taaaacatca tagcagaacc
     1441 ttggacggtt tcagacatac cgtgccaaaa tgacaattct cagtgacaaa ttattctttt
     1501 gttcggt
//