LOCUS AK068456 2911 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013152E20, full insert sequence. ACCESSION AK068456 VERSION AK068456.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2911) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2911 /clone="J013152E20" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2911 /db_xref="Osa1:LOC_Os11g16290" /note="(Rice Genome Annotation Project) NIN-like protein 2, putative, expressed" /note="mapping to R11-TIGRv4S1-000375R (Chr.11: short arm=8949969, long arm=8955365, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 736 a 600 c 670 g 905 t ORIGIN 1 gtttcccttt tctcctcctc ctcctcctcc tcaccgccgg cggcgagcgg ccggccggcg 61 agcagagcag agcagaggag agagccgacc tccatctggg ctccaatcga agctgaagcg 121 cctcgtcgta gtttgggcaa aagaagtttt gatttttttt atttattttg ggtgctgagg 181 aagagtgtaa ttaagctgtg aggattgaga agatggatgg aggtgggacg ccggatgggg 241 atccggtgcc ggacatggac atgctcatgc tgtcatcagc gctcgatggc ctcgacagct 301 acaccgacct cgtcgcgggt tcatcggtag ccgacagcat cttctcagct cttacctgtt 361 tcccaccatc acaagaacga ttgctgcacg tctcgactcc tgtgggttct aattctaggc 421 aagatgattc tgatgtttcc atcactaagg agggtacaac aacaagaaga ggtgattgcg 481 ccgccggatt agcttcaggt gagccggtgg ccgcgggaat tggctctgtc ccgaagccgt 541 tcgacggcgt cacactgacg gagaggatgc tcagggcgct tgcgatgctc aaagaggcgt 601 cgggtggcga agcgatcctt gtgcaggtct ggatgcctgt gaggaatggg gagcagcatg 661 tgctgactac ctctgaccag ccgttcttgc tcgatcagaa gcttacggga tacagggaag 721 tctccaggca gttcacattc tcggctgaag aaggacccgg tctgttcccc ggattgcccg 781 gccgggttct catgtccggc atgccagagt ggacgtcgaa tgtgatgtac tatcatggct 841 cggagtattt gagggttgat tatgctaggc gccacgaggt ccgtggatcc cttgcgatgc 901 cggttttcaa ctcaagtggt gggtcttgct gtgcagtgtt agaagtagta atgacacgag 961 agaaggataa cttttgctta gagatggtca atgtttcgaa tgctctgcag agttctataa 1021 tttctgatga ggcctttcaa atgattaact tcgggtgaat tcctatttct cctacccttg 1081 gtttcacaca gactacatct ggtctttttc ttaaagagac cataaaggta ttttctatct 1141 cgagaaaaaa taatctatag tttcctcgtc tttgaggata caaggtttgt actatcctag 1201 gaggattaat cagcactctc ctgtactgat ccctccctag tctgctcttt gtccttggat 1261 ttgatgctac caatatacat ttcacacttt ggttgttcca ggccttcaat aacccattat 1321 tcctcctttg tgctgcccaa cgttacgccc aattgcaatg caatactgct aagtacctct 1381 tcaaagaatt aagtactgta ggtcatatgt ttgccttcca gtttctcatt ccaaatctat 1441 gtgtttcact aagtcggatc aatatcatgt actggagcaa gaagaatgat tggaagcata 1501 aataggtacc aagtttgtct aatcaggaat tagttttact tggtagttgg tacatccgaa 1561 ctattggtgt gctctgtgca ctcatcaact agattactta aaatgctttc ttttattatg 1621 tggatggttc agctatgaga catttagctt tatttttgag ttatttatat agttaatatc 1681 aattattatt tgctcttatc accaatatta ttagtttcta ttctaatttc tatgcatggt 1741 acaaggtttg acttttgctc aaatatgctt aaaactctcc agagttatgg cttgtttttt 1801 caccgtagag ttgctatggc tacttttttt cacttgaggg tgctcataat tatttccatc 1861 cgagcgtgca tatatggttg taatttgttc tagaacattt tgttataaag ttcatttcat 1921 gattgaatta gcctctgagc ttaatagtga cattgtaatc ttgcagtctg ttcagttaag 1981 cactgtcaat gcatggagac attctcagag ctattcaagg gaccagaaat tagcattgat 2041 ggaaatattc gatgttctgc aagctgtttg tcaagcacac ttgctacctt tggcacttgc 2101 atggattcca gtttgctcca aaagagatgt gcttgtgtca gtagaatatg gtgcaaattt 2161 tggtaaaagg aacaaagaag tgctttgcat agaggaatct gcatgttatg tcaatgacac 2221 gagaatgcgt gattttgtcc aagtctgtgc tgaacacccc cttgagaaag gacaaggtgt 2281 cgctggaaat gcatatttat caaataatcc cttcttctca tctgatgtga aggattatga 2341 tatgcacgct tatccacttg tcaatcatgc ccgtaaattt ggtcttcatg ctgctgttgc 2401 aattaggctg cagagcacat acaccaaaaa tgatgactat gtgcttgagt ttttttcttc 2461 cagtcttgtg caaaggtggt ggagaacaac agctcttact tgacagcata tctgcgacta 2521 tgcggagagt atgcaaaagt ctgagaactg tttcagatgc tgagttgaag gaagatgtta 2581 caagaaagcc atcaaatgaa aatcgatcag gaacaagatg cccttcacct gttaacctta 2641 tttattcagg ccgagaaatt gatgtatcga atgaaacaaa aacaaatacg cctttggaat 2701 atcagataga gggcattgat gaacaactat cagatacaaa aagtactaac aaggttgttt 2761 catcctcaac attctcacta tgtgctttca tcctctctta tctgtcgtgt ggtctgtttt 2821 tctttgtgtg ctttagtcat tcagacatga acaattggaa gtgataactc tgcaggatag 2881 ttttttcagt aaattgtttg aatagttcct t //