LOCUS       AK068213                1545 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013149K13, full insert
            sequence.
ACCESSION   AK068213
VERSION     AK068213.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1545
                     /clone="J013149K13"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             253..1086
                     /db_xref="Osa1:LOC_Os12g40890"
                     /db_xref="RAP-DB:Os12g0601300"
                     /note="(RAP Annotation release2) Similar to
                     Auxin-responsive protein (Aux/IAA) (Fragment)"
                     /note="(Rice Genome Annotation Project) OsIAA30 -
                     Auxin-responsive Aux/IAA gene family member, expressed"
                     /note="mapping to R12-TIGRv4S1-000774R (Chr.12: short
                     arm=25277290, long arm=25282548, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG90803.1"
                     /translation="MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETID
                     LKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQS
                     SVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAA
                     AFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIAD
                     LLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNR
                     S"
BASE COUNT          378 a          400 c          423 g          344 t
ORIGIN      
        1 ggctccttta catcacattt ctagccaccc tctcatcatc accatcaagc tcaaaccaac
       61 aagaagagag ctagcttttg gtactattag ccactagtag atagccaaga agaaaccaag
      121 aaattctttg agctatctaa ttagctaggt ccattgattc atcatcatct ccattgatcc
      181 acttagcttt gaagaagaag aagaagaaga catttagtta gctagctata ttgaggtgag
      241 gtggcggcgg caatggcggc ggacctggcc ttcgaggcga ccgagctccg gctcggcctg
      301 cccggcggcg gcggtgatgg agacgccgcg gcggcggcgg cgaggagctc ctccgggaag
      361 aggggcttcg ccgagaccat cgacctcaag ctgaagctgg agccggcggc cgcggcggtg
      421 gacgacgacg acgacaagga ggaggcggcg gctgacgacc gggagaagaa ggtcgacatc
      481 gtcggagctg acaacgacga cgcctcgccg ccggccgccg ccgccgccgg cgggatgaag
      541 cggtcgccga gccagagcag cgtcgtcacc gccgccgccg accccgagaa gccaagggct
      601 cccaaggcac aggtggttgg gtggccgccg gtccggtcat accggaagaa catcctggcc
      661 gtgcaggccg acaagggcaa ggacgccgcc gacggcggcg gcgacaagtc cggcgccggc
      721 gccgccgccg ccgccttcgt gaaggtgagc atggacggcg cgccatacct gcgcaaggtg
      781 gacctcaaga tgtacaagag ctaccttgag ctctccaagg cactcgagaa gatgttcagc
      841 tccttcacca ttggaaactg tgggtctcat ggggtgaacg gcatgaacga gagcaagatt
      901 gctgatctgc tcaacggctc tgaatatgtg ccaacctacg aggacaagga cggcgactgg
      961 atgctcgtcg gcgacgtccc atgggagatg tttgttgaat catgcaagcg ccttaggata
     1021 atgaaaggat cagaagctat tggccttgca ccgagggcaa tggagaaatg caagaacaga
     1081 agctgagaaa gaagaacatg tcgccatcaa aaacggatgg atcatcatca gatgcaacaa
     1141 tctatctata gcttttctta attgcagctt tgcctcatcc ctgtatcata ctcgcttgct
     1201 gtcctcatct ccaagtctgt acctttcctg atcagtgaaa gtcattttgg tgttgtggtc
     1261 agtttctgtt ctgttgcagt cattaagttc ctaagtgtgt catcttgtct tatacataag
     1321 aaagaagcca agaacatgta ccagtagtac ctgtcccata attatgtctt ttttgctctc
     1381 cctgttcttc cctttctatc tgtttttttt taccttaatg gcacaaaatg taaaggcacc
     1441 ctgctcaaag ggacctcaat gtattttgtc catgaaaagg ttgtttaatt atcttcatgg
     1501 tgtatccatc aaacaaataa ttattactgc aaggtgttat gtgtt
//