LOCUS       AK068099                2365 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013134G20, full insert
            sequence.
ACCESSION   AK068099
VERSION     AK068099.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2365
                     /clone="J013134G20"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2365
                     /db_xref="Osa1:LOC_Os02g15880"
                     /db_xref="RAP-DB:Os02g0259100"
                     /note="(RAP Annotation release2) Conserved hypothetical
                     protein"
                     /note="(Rice Genome Annotation Project) expressed protein"
                     /note="mapping to R02-TIGRv4S1-000475R (Chr.2: short
                     arm=8984618, long arm=8989568, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          578 a          540 c          607 g          640 t
ORIGIN      
        1 gtcttctcgg ctccattttt ccccatcccg acatcgcatc accgcctctc tctttccccc
       61 cccccccccc ccacctcacc tgcgtcctcg ccgctatcgc cgccgccgcc gtcgcagcat
      121 cgggatatcc tcccgccgcg agtttgctga gcacagttgc tgaattttag ggttatctgc
      181 ttcaagcata agtgggccat tgcttctggc ttttactgaa cgtaactcac ttggccaaat
      241 gaaatccatg gtagttggtt attctgaagc atagaattgt tactgctttg tgaacgaata
      301 acatctatct atctagagca ctggaagatg gatcatagag atacttctgg gtttgtcagt
      361 ggaggttgca aagaatcaac gaactgcatc accctaggat ttctaacttt ttagctttgt
      421 taaccattat ttaatctgga agtgaggtta tctggtactt ggcaaaaaaa ttggctgtgt
      481 tttgtctcct gagaaattct ctagcaatgg accccagact tgggcggtca gcgtttataa
      541 atttctcaaa tccaaatgcc tatgtgggca agttccctgt catctccaca gtcagccatc
      601 ctacagcttc tagtcaaatt gatgtgctag ctcattgcag ttcatacaac ctgcctagag
      661 ggaccaagag aaagtttgat ggcttgtcac tagggctggg caactcatca agctcagaat
      721 ctagcaagca aagcatgggt actggctgca ccatatcttc tgctaagggt agtgatgatg
      781 gttcttctat tgatttggat ttgaatcatt ttactctggg caatgaaggt acttccaggc
      841 ttgataagcg ggcctgtgat tctaggaggg ctttggataa gcctgaattg aatcttgagc
      901 tgtctttgtc atcccagtct gctattactg gtgcagactt cactgcagcg actgaatata
      961 atagcccaag tctgcagcca tactatatgg acttagtgcc aacagttgat gaaggatcta
     1021 catctgctcg ccgaccatct ggttgtcagg tactgtcttt ccttaataag actgcaaaga
     1081 tgagtgaatt ttctccaagg gaggttttcc caggtagctc taaccagagt caaggtccgg
     1141 ctccaatgcc aacattgctt caactgccaa aaagtccagt agcctgtact tccggtttat
     1201 ctcgtccaca acagcgcagc agtagcacaa aaaactgtac atacccagga tgtatgaaag
     1261 gagccagagg ttcttcaggg cgttgcattg ctcatggtgg gggtagaagg tgccaaaaag
     1321 atggttgtga caagggggct gagggcaaga caatattttg taaggcccat ggtgggggaa
     1381 ggcgctgcga acaccttgga tgcaccaaga gtgctgaagg tcgtactgac ttctgcatag
     1441 ctcacggtgg tggccgtcgt tgtagccatg aaggatgcaa aagagcagca agagggaaat
     1501 ctggtcgctg tattaaacat ggtggtggca aaaggtgtca acatgcaggc tgtacaaaga
     1561 gtgcaagagg ccgtactggc cgctgtgttg gccatggcgg gggcaagaga tgccaatctt
     1621 ctggatgtga taagagtgca cagggaagca ctaacttttg caaggcacat ggaggcggca
     1681 agcgttgctt gtggggtcac gaaggatctg accatggagc tggtgacact ccttgtgagc
     1741 gccttgcaag aggcaagaat ggcctgtgtg tttatcacaa tccgcaggtg gatgaaaatc
     1801 gtgtccatgg gggtttcagc gttgtcagcg atgcactttc tcagggagat cgaccttcaa
     1861 acactgaaac aagcaggtgc agcattttct cgcatcctat ggaggctcct cgtcgtgtgg
     1921 cagctccagc tgacgagggt cgggtgcatg gtggcaacat cctgtcaatg tttgcaaatg
     1981 gcatgagttt ggggaagcat cccgccaacc aagcagaggc tagcacctct gcacctcgca
     2041 actcaaatcc accaatggca tggtgaccgg taactctgcg gtgcggggca gctggctgta
     2101 gagccttgaa ccgccttctg ctctctccat ttcagtaagc atatgcttcg aaccatctga
     2161 caagtgcctt ctcttcttaa tccttcgggt gtgaaaacta tggtgtgatt gtgtgaactg
     2221 ttgtgtcctg atttgtttag cagtgttgtg aacttgtgat atattattaa tcgtttgtgc
     2281 tttgtaaaat gtaataatca cctgtgtgag ataaataaaa gggggaaggt tacacattag
     2341 atgctgaatt tcaggtcttg tactg
//