LOCUS AK067682 2034 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013116D10, full insert sequence. ACCESSION AK067682 VERSION AK067682.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2034) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2034 /clone="J013116D10" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 544..1722 /db_xref="Osa1:LOC_Os09g25620" /note="(Rice Genome Annotation Project) S-adenosylmethionine decarboxylase proenzyme, putative, expressed" /note="mapping to R09-TIGRv4S1-000409R (Chr.9: short arm=15384707, long arm=15388094, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG90538.1" /translation="MSMSLADSWGSAPASPIGFEGYEKRLEITLSDAPVFVDPCGRGL RALSREQIDSFLDLAKCTIVSHLSNKHFDSYVLSESSLFVYPHKVVLKTCGTTKLLLS IPRILELAAELSLPVLSVKYSRGMFIFPGAQPSPHRSFLEEVSVLNSFFGGLKSGGNA YVIGDAFKPKKKWHVYYATEEPEQPMVTLEMCMTGLDAKKAEVFFKDSTDGSCSSAKE MTMFSGISEIIPEMEICDFEFDPCGYSMNGIYGPAVSTIHVTPEEGFSYASYEAMNFN PSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFAKSWAKGAEVDSYMCDDLVEQELP GGGVLMYQSFTAVTPGAVSPRSTLDGWNSDGAEMVAKSKEMSVCWEGEKAAKKKDADA " BASE COUNT 434 a 500 c 488 g 612 t ORIGIN 1 gacgcctcgg caatccaaag ccctcctcgt cctcgcagag catccattgc ctcgattttc 61 tattccaaat tcccccacgc gaagaacagc cagcgccctc ctcctcctcc tccttcgcct 121 tcctcctggt ttcttgccat ctttccaggg aaggaggaac cgcggcccgg ccgcattctt 181 ggacaagaat tgttggcata aaggaacatt ttgttgatgt tctaatggag tcaaaaggtg 241 gcaaaaagaa gtctagcagt agtagttcca tgtacgaagc tcccctaggc tacaagattg 301 aggacgttcg cccagccgga ggaatcaaga agttccagtc tgctgcttac tccaactgcg 361 ctcgcaagcc atcctgatat tccttcacat gcctttcccc gtagagtagg aatttcctgc 421 aatttttcct ttgttttgtt gcaataaatc tcccttggct ggctgctttc tcaatctctt 481 cccttgtctt ctccgatctc ttctttcctg tcttgtccac tgctccttgc aacacttgat 541 caaatgtcga tgtccttggc tgattcttgg ggctctgccc ctgcctcgcc cattgggttt 601 gaaggctatg agaagcgcct tgagataaca ttgtctgatg cgcccgtctt tgtggacccc 661 tgtggtcgcg gccttcgtgc cctctcacgt gagcagatcg actcgttctt ggatcttgca 721 aagtgtacca ttgtatccca tctttcgaac aagcacttcg actcatatgt gctttcagag 781 tcgagccttt ttgtttatcc ccacaaggtt gttctgaaga cctgtggtac aacaaagctt 841 ctgctctcca ttcctcgcat ccttgagctt gctgcagagt tgtcactgcc tgttctatca 901 gtgaagtact ctcgtgggat gttcatcttc cctggagcgc agccatcacc gcatcgcagc 961 ttcttggagg aggtttctgt gctcaacagc ttctttggtg gcctcaagtc aggtggcaat 1021 gcttatgtca ttggtgatgc attcaagccc aagaagaagt ggcatgtcta ctatgccaca 1081 gaagagcctg agcagcccat ggttacactc gagatgtgca tgactgggct ggatgctaag 1141 aaagctgagg tgttcttcaa ggattccact gatggctcct gctcatcagc taaggagatg 1201 actatgttct ctgggatttc tgaaatcatc cctgagatgg agatttgtga ctttgagttt 1261 gacccgtgtg ggtactcaat gaatggcatt tatggtcccg ccgtctccac gatccatgtc 1321 actcctgagg aaggtttcag ctatgcaagc tatgaagcaa tgaacttcaa tcctagctcc 1381 ttggtctacg atgatttgat caagaaggtc ctggcttgtt tctgcccttc agacttttcg 1441 gtcgctgtta ccatcttcgg tgggcatggt tttgccaaat catgggcaaa aggtgcagag 1501 gttgattcct acatgtgcga tgatcttgtt gagcaagagc ttcctggtgg cggtgtgctg 1561 atgtatcaga gttttactgc tgttactcct ggtgctgtgt caccgaggtc gaccttggat 1621 ggctggaaca gcgatggagc agagatggtt gcgaagagca aagagatgag tgtctgctgg 1681 gaaggagaga aggcggcgaa gaagaaagat gcagatgcct gagaaatcag cagttcttca 1741 acctcaagtt gcaagtttga ttcatctgaa gtttctgaga cgccttattt ggttctgctc 1801 ttgcagtttc ggttaagcag ctggctgggc taccggcaaa gcatatgtta cttgttcatt 1861 gttcttttat atctgtctgc ccaaataagt gctctagatg gtttgctgcg tctgccatag 1921 tgagcaattc agattgtagt agaattctta tctgttgccg atgctcttta agggagaatg 1981 atatgtaact cgattatttt caataactat tgcaacttcc ataattttct gtcc //