LOCUS AK067520 2062 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013110E12, full insert sequence. ACCESSION AK067520 VERSION AK067520.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2062) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2062 /clone="J013110E12" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2062 /db_xref="Osa1:LOC_Os01g69900" /db_xref="RAP-DB:Os01g0923300" /note="(RAP Annotation release2) CBS domain containing protein" /note="(Rice Genome Annotation Project) CBS domain containing protein, expressed" /note="mapping to R01-TIGRv4S1-001901F (Chr.1: short arm=40712188, long arm=40716024, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 521 a 464 c 588 g 489 t ORIGIN 1 ggcagcctcc ggtcgcctcc tccgccatct actcggagct cccggatcga ggggagcgct 61 cgccgccgcc gcagcgacct cgccggatca cggcggcggg ggccgatcga tcggaggtcg 121 gtcgattgcc ttcggcgggt gggagatgga tggcggcgtg ggaggcgcgc acagctcgcg 181 gaggagcgtg tcctcgtcga ccggatccag gaggagggcc gggcccacgg agaacggcca 241 ccacgacgcc gccgctgccg ccgccggcag gaggtcctcc gcttccatct cccgcgcctc 301 gcagcagtcg atgaccgggg agaggaccgt gaagaggtta agattgtcca aggcactgac 361 gattccggat cacacaaccg tctacgaggc ttgtcggagg atggctgcac gcagggtgga 421 cgctgtgttg ctgaccgact ccaatgcttt gctgtgcggg atccttactg acaaggacat 481 aaccacaaga gtaattgctc gcgaattgaa gctagaagag acacctgttt caaaggtcat 541 gacaagaaat cctctctttg ttctgtctga cacactcgcg gtcgagacat tgcagaagat 601 ggtgcaaggt aagttcagac atttacctgt cgtggagaac ggtgaagtca ttgcactgct 661 cgacatagcc aagtgcctgt atgatgctat tgcgcgaatg gaaagggcag ccgagaaagg 721 aaaagccatt gctgctgctg ttgagggtgt agagaagcac tggggagctt ctgtgtctgg 781 tcctaatact tttattgaga ctcttcgaga gcggatgttt aggccatcac tatctaccat 841 tatttctgag aattcaaagt agagtggtga ctgttgcacc aactgacaca gtgttgacgg 901 catcaaaaaa gatgcttgaa gttaaagtaa gttcagcggt tgtagcaatt gaaaacaagc 961 ctggggggat tctgacctct agagatattt tgatgcgtgt tatagcccag aatctcccac 1021 ctgaatctac tactgttgag aaggtcatga cccagactcc tgaatgtgcc acggttgaca 1081 ctccaatcct tgatgccctc catacaatgc acgacggaaa gtttttacat ttgcctgtct 1141 tagacaagga tggaaatgtt gtaactgtag ttgatgtcct tcacataacc catgctgcaa 1201 ttgcaactgt tggaaacagc gcgggatctg gatctgaggc gacatcagct atgatgcaga 1261 gattttggga ttcagcaatg tccattggac ctcttgatga tgatgatgac tccagaagtg 1321 aaggatcaac taaagtggcg tctgaggcaa cagatgtagg aagatcagct ttttatccgg 1381 cttctggttt gtccaacaca ttcgggttca agattcaaga caaacaaggc aggatgcaca 1441 gatttaactg cgaaacgagc agcttgacag agttgataac cagcattcta cagaggcttg 1501 gcgatgacat cgatagaaaa aacctaccac aaattttgta tgaagatgag gatcatgata 1561 aggtcatact ttcatcggac agtgaccttg tagctgctgt ggaccatgca aggcaaatcg 1621 gttggaagag cttgaagttg cacttggatt acgccggtgt tggtcgccgg aagagaggcg 1681 gtggtggcac ttcagacttc gagtacgctg gaaaggatgc gtgggcttca gcctacagcg 1741 ctgtggctgc aggagcagct cttgttgcag gccttggcgt gatggcttac ctgaagagag 1801 caggctaggc ttgcagcttt gcagttgcag atgcagatgc agatgaggct ttcatcttgt 1861 gatgatgatg atacgaaatg ttacagaatc aaatttgagc agattggtgt gtaaattaat 1921 tcttgtgggg aaaaaaatct gtaataatct cacggcagcg gatggctgcc tacatataat 1981 gacgaaattt tccggtggct aaaaaaatgt ctggtattca gcttgtatcg ccactgtaca 2041 atgaagcaaa tgctctgtac tg //