LOCUS       AK067520                2062 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013110E12, full insert
            sequence.
ACCESSION   AK067520
VERSION     AK067520.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2062
                     /clone="J013110E12"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2062
                     /db_xref="Osa1:LOC_Os01g69900"
                     /db_xref="RAP-DB:Os01g0923300"
                     /note="(RAP Annotation release2) CBS domain containing
                     protein"
                     /note="(Rice Genome Annotation Project) CBS domain
                     containing protein, expressed"
                     /note="mapping to R01-TIGRv4S1-001901F (Chr.1: short
                     arm=40712188, long arm=40716024, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          521 a          464 c          588 g          489 t
ORIGIN      
        1 ggcagcctcc ggtcgcctcc tccgccatct actcggagct cccggatcga ggggagcgct
       61 cgccgccgcc gcagcgacct cgccggatca cggcggcggg ggccgatcga tcggaggtcg
      121 gtcgattgcc ttcggcgggt gggagatgga tggcggcgtg ggaggcgcgc acagctcgcg
      181 gaggagcgtg tcctcgtcga ccggatccag gaggagggcc gggcccacgg agaacggcca
      241 ccacgacgcc gccgctgccg ccgccggcag gaggtcctcc gcttccatct cccgcgcctc
      301 gcagcagtcg atgaccgggg agaggaccgt gaagaggtta agattgtcca aggcactgac
      361 gattccggat cacacaaccg tctacgaggc ttgtcggagg atggctgcac gcagggtgga
      421 cgctgtgttg ctgaccgact ccaatgcttt gctgtgcggg atccttactg acaaggacat
      481 aaccacaaga gtaattgctc gcgaattgaa gctagaagag acacctgttt caaaggtcat
      541 gacaagaaat cctctctttg ttctgtctga cacactcgcg gtcgagacat tgcagaagat
      601 ggtgcaaggt aagttcagac atttacctgt cgtggagaac ggtgaagtca ttgcactgct
      661 cgacatagcc aagtgcctgt atgatgctat tgcgcgaatg gaaagggcag ccgagaaagg
      721 aaaagccatt gctgctgctg ttgagggtgt agagaagcac tggggagctt ctgtgtctgg
      781 tcctaatact tttattgaga ctcttcgaga gcggatgttt aggccatcac tatctaccat
      841 tatttctgag aattcaaagt agagtggtga ctgttgcacc aactgacaca gtgttgacgg
      901 catcaaaaaa gatgcttgaa gttaaagtaa gttcagcggt tgtagcaatt gaaaacaagc
      961 ctggggggat tctgacctct agagatattt tgatgcgtgt tatagcccag aatctcccac
     1021 ctgaatctac tactgttgag aaggtcatga cccagactcc tgaatgtgcc acggttgaca
     1081 ctccaatcct tgatgccctc catacaatgc acgacggaaa gtttttacat ttgcctgtct
     1141 tagacaagga tggaaatgtt gtaactgtag ttgatgtcct tcacataacc catgctgcaa
     1201 ttgcaactgt tggaaacagc gcgggatctg gatctgaggc gacatcagct atgatgcaga
     1261 gattttggga ttcagcaatg tccattggac ctcttgatga tgatgatgac tccagaagtg
     1321 aaggatcaac taaagtggcg tctgaggcaa cagatgtagg aagatcagct ttttatccgg
     1381 cttctggttt gtccaacaca ttcgggttca agattcaaga caaacaaggc aggatgcaca
     1441 gatttaactg cgaaacgagc agcttgacag agttgataac cagcattcta cagaggcttg
     1501 gcgatgacat cgatagaaaa aacctaccac aaattttgta tgaagatgag gatcatgata
     1561 aggtcatact ttcatcggac agtgaccttg tagctgctgt ggaccatgca aggcaaatcg
     1621 gttggaagag cttgaagttg cacttggatt acgccggtgt tggtcgccgg aagagaggcg
     1681 gtggtggcac ttcagacttc gagtacgctg gaaaggatgc gtgggcttca gcctacagcg
     1741 ctgtggctgc aggagcagct cttgttgcag gccttggcgt gatggcttac ctgaagagag
     1801 caggctaggc ttgcagcttt gcagttgcag atgcagatgc agatgaggct ttcatcttgt
     1861 gatgatgatg atacgaaatg ttacagaatc aaatttgagc agattggtgt gtaaattaat
     1921 tcttgtgggg aaaaaaatct gtaataatct cacggcagcg gatggctgcc tacatataat
     1981 gacgaaattt tccggtggct aaaaaaatgt ctggtattca gcttgtatcg ccactgtaca
     2041 atgaagcaaa tgctctgtac tg
//