LOCUS AK067352 1408 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013101L22, full insert sequence. ACCESSION AK067352 VERSION AK067352.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1408) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1408 /clone="J013101L22" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 14..1153 /db_xref="Osa1:LOC_Os01g12320" /db_xref="RAP-DB:Os01g0223200" /note="(RAP Annotation release2) Lipolytic enzyme, G-D-S-L family protein" /note="(Rice Genome Annotation Project) alpha-L-fucosidase 2 precursor, putative, expressed" /note="mapping to R01-TIGRv4S1-000390R (Chr.1: short arm=6721747, long arm=6725340, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG90381.1" /translation="MIMLWLPAAVSLLLSSSLHVAGDAGGGVASLSVRRYDAIFSFGD SLADTGNNPVVFDWYSIFDPVTRPPYGSTFFGRPTGRNCDGRLVLDFVAERLGLPLVP PFLAYNGSFRHGANFAVGAATALDSSFFHGAGDPPGASPFPLNTSLSVQLSWFDSLKP SLCSTTQECKDFFGRSLFFVGEFGINDYHSSFGRRSMQEIRSFVPDIIRTISMAVEKL IGDGATTVVVPGMIPSGCSPPVLVTFADAGAAEYDASTGCLREPNEVATLHNSLLLDA VEELREKHPDVAIMHTDLFRHVSEMVQNPDKFGFQKDVLSVCCGGPGKYHYNTRIICG DEGATTCVDPSKSLYWDGVHLTEAAYHYIADDWLHAITLSARATS" BASE COUNT 292 a 443 c 361 g 312 t ORIGIN 1 gagaacacga aagatgatca tgttgtggct gcccgccgcc gtctcgctcc tcctctcgtc 61 gtcgctgcat gtcgccggtg acgccggcgg cggcgtcgcc tccctctccg tccggcgcta 121 cgacgccatc ttcagcttcg gcgactcctt ggccgacacc ggcaacaacc ccgtcgtctt 181 cgactggtac tccatcttcg accccgtcac ccgccctccc tacggctcca ccttcttcgg 241 ccgccccacc ggccgcaact gcgacggccg cctcgtcctc gacttcgtcg ccgaacgcct 301 gggcctgccg ttggtgccgc cgttcttggc ttacaacggg agcttccggc acggcgccaa 361 cttcgccgtc ggcgccgcca ccgcactcga ctccagcttc ttccacggcg ccggcgatcc 421 cccgggcgcc agcccgttcc ctctcaacac cagcctaagc gtgcagctga gctggttcga 481 ttcactcaag ccctcactct gcagcacaac tcaagaatgc aaggatttct tcggcagatc 541 gctcttcttc gtcggcgaat tcggcatcaa cgactaccac tcctccttcg ggaggaggag 601 catgcaagaa atcagatcgt tcgtcccgga catcatccgt accatctcca tggccgtcga 661 gaagctgatt ggcgacgggg cgaccacggt ggtggttccg ggcatgatcc cgtcgggatg 721 ctcgccgccg gtgctcgtca ccttcgccga cgccggcgcg gcggagtacg acgcgagcac 781 cggctgcctg agggagccca acgaggtagc gacgctgcac aactcgctgc ttctggacgc 841 cgtcgaggag ctccgggaga agcacccgga tgtcgccatc atgcacaccg atttgttcag 901 acacgtctcg gagatggtcc agaatcctga caagtttggg tttcaaaagg atgttctcag 961 cgtttgctgt ggaggtcccg gaaaatacca ctacaacacc aggataatct gcggcgatga 1021 aggtgcgacc acctgtgtgg atccatccaa gagcttgtac tgggacggcg tccacttaac 1081 cgaggcagct taccactaca tcgccgatga ttggcttcat gccataacct tatctgcaag 1141 agctacctcc taaaattgat atggcacgaa cgtcggatac acacatgtaa tgctagtttt 1201 ttttttaaaa agaactacat gtaatgttag ttgttggtcg attttccttc gtgaaggaac 1261 atcagccttg cagatgatcc gagtaaaatt gtggagaaaa aactcctcta ttcaattaaa 1321 ttggcggtct catcgattcg ttcaaaaaaa attatgaaaa aaactgctga acggatggat 1381 atttgaataa aattcgttct tgttgtgc //