LOCUS       AK067302                3100 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013102H14, full insert
            sequence.
ACCESSION   AK067302
VERSION     AK067302.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3100
                     /clone="J013102H14"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..3100
                     /db_xref="Osa1:LOC_Os05g04330"
                     /db_xref="RAP-DB:Os05g0133900"
                     /note="(RAP Annotation release2) Similar to
                     Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta)
                     (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)"
                     /note="(Rice Genome Annotation Project) DNA
                     methyltransferase DMT106, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000107F (Chr.5: short
                     arm=1943619, long arm=1952912, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          854 a          683 c          799 g          764 t
ORIGIN      
        1 ggcgcatctt cccccttttg gaatcgcccg gtccccatct ccacttcgaa ccaaacccgg
       61 aggcgcgccg cgcgcctccc cgccgccgcc gtcgagcggg aggggatcgg agcgcgcggc
      121 cgccgccgtc gccgagtccg tccgacctcc gtcccccgcg ccaacgcagc agcagagcag
      181 cagtgtggga aggaagaagg gaagccgctg ccgcgagcgg cgagcgggag tgggggtttc
      241 tccattgtta ccatttcagg ccagccgccg tcgacgccga ggcggggtgg gccccacctg
      301 tcactggcca tgttcgcctc tatatatata caccgcgccg ccccccttcc gccgccaacc
      361 tgagccgagc ggggagacgc gtcttcctcc tcctcctcct ccattgctgc tccccctccc
      421 ccttcctcct acaggggcat gcgattttgg aagcggagtt gatacttgat cgagatggtt
      481 aaagtagaag atgatgtgga gggcagtggc atcaacgctt ctgttggtga tctcagggat
      541 gctgctgtca atccacagcc tgccctgctg cgtgctactg ttaaggagga ggaaggacag
      601 ccaagctctt cctccagtca tgtaagatca caatttattg gcatggggtt ttcaccaatg
      661 ttggttgaca gggtgcttca gaaacacggt gacagagatt cagatactat actggaggct
      721 cttttgtcac agtctgctct tcaaaaatct gggtctgaat caggttcatt gggagatctc
      781 tttgattctg ataatgaaga aaatagttct cattttgcgc ctaggaaaga agttatccaa
      841 gacattaagg ttggagctga ttcatcctca gaaaagagat catatctact gagtacaatg
      901 aacttctcgc agcgagaagt tgatttggca ctcaaccagc taggtgagga agcatcattg
      961 gaacagcttg tagatttcat tgttactggt caagtgtcag gttgctctgg aggaaacgaa
     1021 aatggagatg cttcaaatga ggtaaaggat gaatcactgt ttggagtaat ggataaaaca
     1081 ctacatttac tccagatggg ttttacggag gaagaagtgt catctgtcat tgacaaagct
     1141 ggtccagaag caacagtttt ggagctggct gacaccattt ttgcacgtag aattgccagt
     1201 agcattgagc agaaagaggt gaaagttgag cctgactttc tagatgagac agaaaccagc
     1261 tattcagcat accatccctc aaattctggt ctaaggtact atgatgacga ccatgacaac
     1321 ataaggatta aaagggctaa gcatatgttt atagatgaca gtgcgggttc cagtagtcgt
     1381 gctggaaatc aacctttaga tccatggctt aaggatcacc gtgccacaac tagtgatggg
     1441 tctgtcaagg aagaatttga tgcaatgaca ccaggcatcc gtagaaatgt tcgcagtgat
     1501 gtcgccaatc ccccatattt cttatatgga aatgttgtag aaattcccaa agctacatgg
     1561 cgtcagctgt cagagttctt atataatgtg gagccagagt ttgtaaatag ccagtttttc
     1621 tcggctctct cacgaaagga gggttacatt cataaccttc caacagaggg aaggcgtaac
     1681 ctggttccta ggtcaccaat gactatcgaa gaagcattcc cattcacaag gcagtgctgg
     1741 ccatcgtggg acacaagaaa acaacttaac agtgttgcta cagaagttgc aggaatagag
     1801 cagctgtgtg agagactggg aaagatggta agagactcag gaggttatct ttcacaagaa
     1861 aagaaaacgc acatcatgca ccagtgcaag ctggctaacc tcatctgggt tggcccagat
     1921 aggttaagtc ctttggatcc acaacaagtg gaacggatac ttggctaccc acggaaacac
     1981 acaaacctgt ttggcctgaa tccacaagat agaatagaag ccatgaggta cagtttccag
     2041 actgacacac tcggctatct tttgtcagtc ctgaaggacc tgtatccaga tgggctaagg
     2101 gtgctatcaa tctacagtgg aattggaggt gcagcaattg ccctccatcg cctagggata
     2161 ccactacagt gtgtagtatc tgttgaccaa tctgatacga acaggaaaat tttgagaagg
     2221 tggtggagta atactgaaca aaaggggcaa ctgaggcaga taaataccat ttggaagctg
     2281 aagattaatg tacttgagga cctggtgaaa gaatttggtg gttttgacat aattattggt
     2341 ggaaacttca gttcctgtaa aggtggtaca acagtaaact catccatggg catggattcc
     2401 aaccagtttt ttgagtatgt tcgtgttgtt caaagagtga agcatataat gggtcggctc
     2461 cagaaccgtg gatgattttt tggttacacc ggcagcagca aagtgggagg ggggaaaaga
     2521 atacgcggcg tcagaatctc ggacaaaaaa atgtagttcc acttccatat gcaccagctt
     2581 tcccaaatgg ctgcacacag ggttcatctc tgctttctaa tggaggacgg tgaagaaatt
     2641 ctgaactagt tttcatgctg acctcagaaa tcaccatcct acaaacgcgc attgctttcg
     2701 agcatgttcg gggataagct tcaccaggaa ttccattggc atacccttca gttctgttca
     2761 aatcggccag attagtagat aattataagt tgatcggtgg ttcagaaatt ttcgtctacg
     2821 catgtcatat gtcagccggt gttgcaagct taccatgggg cttgaagttg aagagaggag
     2881 gaaggaaacg gccgttcggt aagcgggtgt ttggatcacg gagttcatcg aagaagggat
     2941 ggatcaatgc ttccgactgt aatggcaaat aaagaaatgc acaatctgta actactagta
     3001 cttggcaagg cagtgcatgt ttgtatgatg aagtaattag aaaaatgtaa cacaatagtg
     3061 atgccaagaa ctaaaacttt ctctaaaaaa tggtgttggc
//