LOCUS       AK067289                1759 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013103K22, full insert
            sequence.
ACCESSION   AK067289
VERSION     AK067289.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1759
                     /clone="J013103K22"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             105..1592
                     /db_xref="Osa1:LOC_Os08g15840"
                     /db_xref="RAP-DB:Os08g0258200"
                     /note="(RAP Annotation release2) Zinc finger, RING-type
                     domain containing protein"
                     /note="(Rice Genome Annotation Project) XBAT32, putative,
                     expressed"
                     /note="mapping to R08-TIGRv4S1-000323R (Chr.8: short
                     arm=9622276, long arm=9626367, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG90353.1"
                     /translation="MGLLGMVGDSFGCSATGERLVSAARDGDIQEAMALLELNPRLAR
                     YSTFGIRNSPLHYSAAKGHHEIVSLLIESGVDINLRNCRGQTALMQACLYGHWKVVQI
                     LVLFKANIHKKDCFSGATAIHFAALKGHTRCLRLLVADYVPSLPEFWSVMHAKCTDET
                     NKEAFDAVALRRLINNKSDGGVTPLHLAALHGHAECVQLLLDLGASVSEVTINDGSTI
                     DLIGSGSTPLHYAACGGSAVCCQLLVAAGANMRAQNTNGLTPLMVARSWHKSSVEGIL
                     TKRSEVPVRILPSSYLSLPLMSIVKIARECGWRKTSVSSVCHDPCAICLDTECTVSAE
                     GCGHEFCTKCALYLCATASSSTSIRGVPGSIPCPLCRHTIVSFVRLTSTTPIKELPWT
                     NKSLALCAAGASTGSKYAGPAAITSSKYAGSLHRRSEMRSLRSSSVDLGCSSFRTASS
                     GKLSSIKLNCTGADETMPCLVNCFRPDVQRSSSYRERIRRYSQFS"
BASE COUNT          397 a          421 c          432 g          509 t
ORIGIN      
        1 gaatattgta gttcctacta caggctctcc attctcgttg ccttgctagc tagccttggc
       61 ataggaatcc tttgattgtt ttgtaggtcc agggtagacg catcatgggg ctcttaggta
      121 tggtgggcga ctcattcggt tgctcagcta ctggtgagcg gcttgtctct gctgcaaggg
      181 atggagacat ccaggaggct atggccctgt tggagcttaa cccccgactt gcgcggtatt
      241 caacgtttgg gatccggaac tcaccccttc attactcagc agcaaagggc caccatgaga
      301 ttgtttctct cctaattgag tctggtgttg atatcaacct caggaactgc agaggacaga
      361 ctgctctaat gcaagcttgt ctatatggtc attggaaagt tgtacagatc ctagttcttt
      421 ttaaagctaa tattcacaaa aaagattgtt ttagtggcgc gacagctatt cattttgccg
      481 ccctaaaagg tcatactcgg tgccttcggc tccttgtggc tgattacgta ccaagcttgc
      541 cagaattttg gagtgtaatg cacgcaaaat gcacagatga aacaaataag gaagcttttg
      601 atgcggtagc tctccggagg ctaataaaca acaagtctga tgggggcgtc acaccgcttc
      661 acttggcagc ccttcatggg catgctgagt gcgtgcaatt gctgttagac cttggagcct
      721 ctgtttcaga ggtcactatc aatgatggtt caactattga tctcataggt tcaggaagca
      781 cacctctcca ctatgcggcc tgtggtggaa gtgctgtatg ctgtcaactt cttgttgcag
      841 ccggagcaaa catgagagct caaaatacta acgggttgac ccctttgatg gtggctcgtt
      901 catggcacaa aagtagtgtt gaaggtatcc taaccaaacg gtcagaagtt ccagtacgca
      961 ttcttccatc atcatatctg tctctcccac tgatgagcat tgtcaaaatt gccagggaat
     1021 gtgggtggag aaaaacttct gtctcatctg tttgccatga cccatgcgcc atatgtttgg
     1081 atacggaatg tacagtgtct gcagaagggt gtggccatga gttctgcacc aaatgtgcgc
     1141 tctacttgtg cgccaccgct agcagctcaa catctatccg tggtgttcct ggctccatac
     1201 cttgcccttt gtgccgccac acgattgtct cattcgttag actcacaagt acaaccccaa
     1261 taaaggagct tccgtggacg aacaaatcgt tagctctatg tgcagcaggg gcaagcaccg
     1321 gttccaaata tgctggtcct gcagcaatca ctagttccaa gtatgccggt tctttgcacc
     1381 gaaggtctga gatgcgcagc ctgcgctcct cttcagttga tctaggctgc tcatcgtttc
     1441 gaaccgcgag ctcagggaag ctgtcgtcga taaagctgaa ttgcaccgga gccgacgaga
     1501 cgatgccctg cctcgtcaat tgcttcaggc cggatgtgca gcggtcgtct tcgtataggg
     1561 aaagaattag gagatattca caattttcat agcattactg tctatttgta tttgtgcctc
     1621 ccatccattt tgtgagtttc cgggggtttg gcagtacaaa cttgtgcagt gtttgttcat
     1681 gcttttctct tggcttcttc atacctgtag tctgttctgt tcttctgctt gtggtcttgt
     1741 aacatgacat gtgatcctc
//