LOCUS AK066420 1824 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013067J21, full insert sequence. ACCESSION AK066420 VERSION AK066420.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1824) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1824 /clone="J013067J21" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1824 /db_xref="Osa1:LOC_Os02g43930" /db_xref="RAP-DB:Os02g0656500" /note="(RAP Annotation release2) DnaJ-like protein" /note="(Rice Genome Annotation Project) dnaJ protein homolog 2, putative, expressed" /note="mapping to R02-TIGRv4S1-001091F (Chr.2: short arm=26513468, long arm=26517486, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 505 a 421 c 454 g 444 t ORIGIN 1 gctctctctc tccctcgccg cgccgccgcc gaacacaccc ccccaccccc cctccccaca 61 cgcctccgcc tcctcgcacc gaaccgcctc ggcgcgagcg cgagggagag agctcctctt 121 ctcctccacg gcggctgcgc ggcgtcgtcc cgctccaccg ggccgtcgtc tggatctgat 181 ctaggagcgg tcgcttcttc ctcttccgga agcccttttt atcagtcatg tacggacgca 241 tgccaaagaa gagtaacaat accaagtatt atgaggtgct tggtgtatct aagacagcaa 301 cccaggatga gctgaagaaa gcgtaccgta aagctgccat taaaaaccac cctgataagg 361 gtggagaccc tgagaagttt aaagaattgg ctcaagctta cgaggttctt aatgatcctg 421 aaaagaggga aatctatgac caatatggcg aggatgcact caaagaagga atgggaggag 481 gcagcagcag tgatttccat agtcccttcg atttatttga gcaaattttt cagaatcgtg 541 gtggctttgg gggtagagga cacagacaaa agcgtggcga agatgtggta catactatga 601 aggtttcttt agaagacctg tataatggta ctaccaaaaa actgtctttg tcacggaatg 661 ctctgtgcac aaagtgcaag ggtaaaggat ccaagagtgg ggcagcagca acttgccatg 721 gttgtcatgg tgcaggaatg agaacaataa caagacaaat tgggcttggc atggtccaac 781 agatgaacac tgtttgccct gaatgcagag gatcaggtga gatgataagt gacaaggata 841 aatgcccgag ttgtaaggga aacaaagtag tccagcagaa gaaggtcttg gaggttcatg 901 ttgagaaggg aatgcaacat ggccaaaaga ttgtattcca gggtgaagct gatgaagctc 961 ctgatacagt gacaggagac atagtttttg tcttgcaact taaagaccac ccaaaattta 1021 agaggaagtt tgatgacctc tttactgagc acacaatctc cctgaccgag gctctgtgtg 1081 gcttccagtt tgttctaacc catcttgatg gtcggcaact cctaatcaaa tctaatccag 1141 gggaggttat aaaacctggt caacacaagg ccatcaatga tgaaggcatg ccccagcatg 1201 gccgcccttt catgaaaggt cgtctttttg ttgaattcaa cgtggagttt cctgagcctg 1261 gtgcactcac tcctggccaa tgccgatcgc ttgagaagat tttgccacca cgacccagga 1321 atcaattgtc agacatggag ctagatcaat gtgaggagac caccatgcat gatgtcaaca 1381 tagaagagga gatgaggcgc aggcagcagc acaggcggca ggaagcatat gatgaagacg 1441 acgacgagga tgctggagct ggaccaaggg tacagtgtgc ccagcagtaa gaacaattcg 1501 atgccattcg gactagacga tttagcgtct cttatcatcc aaagaccgcg gtagctactg 1561 agttcattct attctttttt ttaatgtacc cccacctaaa gtagctgatg catgttatga 1621 tttctctttt gtgggaaatg ttatgctacc atttttgttg tcttaagatt aaggagcttg 1681 ctattagtca taatgatgtt gcggcctcac tacaattatt acagcctgcc gtattatata 1741 ccaaaatgag ctaatcctcg acaataattc ttacagacag cggaccgaat cagttgtatt 1801 atactattat gcctgtggtt ctgt //