LOCUS       AK066420                1824 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013067J21, full insert
            sequence.
ACCESSION   AK066420
VERSION     AK066420.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1824
                     /clone="J013067J21"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1824
                     /db_xref="Osa1:LOC_Os02g43930"
                     /db_xref="RAP-DB:Os02g0656500"
                     /note="(RAP Annotation release2) DnaJ-like protein"
                     /note="(Rice Genome Annotation Project) dnaJ protein
                     homolog 2, putative, expressed"
                     /note="mapping to R02-TIGRv4S1-001091F (Chr.2: short
                     arm=26513468, long arm=26517486, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          505 a          421 c          454 g          444 t
ORIGIN      
        1 gctctctctc tccctcgccg cgccgccgcc gaacacaccc ccccaccccc cctccccaca
       61 cgcctccgcc tcctcgcacc gaaccgcctc ggcgcgagcg cgagggagag agctcctctt
      121 ctcctccacg gcggctgcgc ggcgtcgtcc cgctccaccg ggccgtcgtc tggatctgat
      181 ctaggagcgg tcgcttcttc ctcttccgga agcccttttt atcagtcatg tacggacgca
      241 tgccaaagaa gagtaacaat accaagtatt atgaggtgct tggtgtatct aagacagcaa
      301 cccaggatga gctgaagaaa gcgtaccgta aagctgccat taaaaaccac cctgataagg
      361 gtggagaccc tgagaagttt aaagaattgg ctcaagctta cgaggttctt aatgatcctg
      421 aaaagaggga aatctatgac caatatggcg aggatgcact caaagaagga atgggaggag
      481 gcagcagcag tgatttccat agtcccttcg atttatttga gcaaattttt cagaatcgtg
      541 gtggctttgg gggtagagga cacagacaaa agcgtggcga agatgtggta catactatga
      601 aggtttcttt agaagacctg tataatggta ctaccaaaaa actgtctttg tcacggaatg
      661 ctctgtgcac aaagtgcaag ggtaaaggat ccaagagtgg ggcagcagca acttgccatg
      721 gttgtcatgg tgcaggaatg agaacaataa caagacaaat tgggcttggc atggtccaac
      781 agatgaacac tgtttgccct gaatgcagag gatcaggtga gatgataagt gacaaggata
      841 aatgcccgag ttgtaaggga aacaaagtag tccagcagaa gaaggtcttg gaggttcatg
      901 ttgagaaggg aatgcaacat ggccaaaaga ttgtattcca gggtgaagct gatgaagctc
      961 ctgatacagt gacaggagac atagtttttg tcttgcaact taaagaccac ccaaaattta
     1021 agaggaagtt tgatgacctc tttactgagc acacaatctc cctgaccgag gctctgtgtg
     1081 gcttccagtt tgttctaacc catcttgatg gtcggcaact cctaatcaaa tctaatccag
     1141 gggaggttat aaaacctggt caacacaagg ccatcaatga tgaaggcatg ccccagcatg
     1201 gccgcccttt catgaaaggt cgtctttttg ttgaattcaa cgtggagttt cctgagcctg
     1261 gtgcactcac tcctggccaa tgccgatcgc ttgagaagat tttgccacca cgacccagga
     1321 atcaattgtc agacatggag ctagatcaat gtgaggagac caccatgcat gatgtcaaca
     1381 tagaagagga gatgaggcgc aggcagcagc acaggcggca ggaagcatat gatgaagacg
     1441 acgacgagga tgctggagct ggaccaaggg tacagtgtgc ccagcagtaa gaacaattcg
     1501 atgccattcg gactagacga tttagcgtct cttatcatcc aaagaccgcg gtagctactg
     1561 agttcattct attctttttt ttaatgtacc cccacctaaa gtagctgatg catgttatga
     1621 tttctctttt gtgggaaatg ttatgctacc atttttgttg tcttaagatt aaggagcttg
     1681 ctattagtca taatgatgtt gcggcctcac tacaattatt acagcctgcc gtattatata
     1741 ccaaaatgag ctaatcctcg acaataattc ttacagacag cggaccgaat cagttgtatt
     1801 atactattat gcctgtggtt ctgt
//