LOCUS AK065980 2148 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013049G01, full insert sequence. ACCESSION AK065980 VERSION AK065980.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2148) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2148 /clone="J013049G01" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 145..1731 /db_xref="Osa1:LOC_Os07g47500" /db_xref="RAP-DB:Os07g0671700" /note="(RAP Annotation release2) Similar to Arginine methyltransferase-like protein" /note="(Rice Genome Annotation Project) histone-arginine methyltransferase CARM1, putative, expressed" /note="mapping to R07-TIGRv4S1-001096F (Chr.7: short arm=28400640, long arm=28407860, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG89761.1" /translation="MASPDLFPNVSFSHVSVPAAAGASTEVTGGATAVFGGDASTGAP RLSLVWSGETQAKHTLEIDLSDAQIFKLGPTEWLCVSGESEAKDGVEEKSYSRAIKVV LRTEAESKAFYLAFQQWKHRVISGKAGEPLENGLIIGSKSKFDTKIEASSAKMYFHYY GQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGILSLFAAQAGARHVY AVEASEMAEHAQRLISGNPSLGQRITVIKGKVEEVELPEKADILISEPMGTLLVNERM LESYVIARDRFLVPGGKMFPTTGRIHMAPFSDEYLYVEMANKALFWQQHNFFGVDLTP LHGSAFQGYFSQPVVDAFDPRLLVSPPTFHTLDFTTMKEEELYEIDIPLNFVASVGTR VHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCILSQPLYVMAGQEITGRLHLV AHSAQSYTIYLTMSAKMWGEGAEQGGILQTSTAKLELKEPYYRLSQPQPYVMQQDQQQ QQLPSLQPQSPLWDYHYGQD" BASE COUNT 547 a 515 c 544 g 542 t ORIGIN 1 gttactccac ccacgcgtac aaacagcgag ctcctccacc ccgcgacgcc gcgcgcctcc 61 gcccaaaacc ctagccaccc cgcgtcgccc gcctcggcgc gcccaaaacc ctagggcatc 121 ccggatccga agctcccggc cccaatggcg tcgccggacc tgttcccgaa cgtctccttc 181 tcccatgtct ccgtccccgc cgccgcgggc gcgtcgacgg aggtcaccgg cggcgccacg 241 gccgtgttcg gcggggacgc gtccaccggg gccccgcgcc tcagcctcgt ctggtccggg 301 gagacccagg cgaagcacac gctcgagatc gatctctctg acgcgcagat atttaagctg 361 gggccgacgg agtggctgtg cgtgagcggc gagtcggagg ctaaggacgg tgtggaggag 421 aagtcatatt caagagcaat taaggttgtt cttaggacag aagctgagag caaagccttc 481 tatttagctt ttcaacaatg gaaacaccga gtgattagtg gaaaagctgg tgaacctttg 541 gaaaatggat taataattgg ttctaaaagc aaatttgata caaaaattga ggcctcatca 601 gcaaagatgt atttccacta ctatggccag ttattacatc agcaaaatat gttgcaagac 661 tttgtcagga caggaacata ctatgctgct gtaatggaaa atcgatccga ttttgagggt 721 cgagttgtgg ttgatgttgg agctggtagt ggcattcttt cattatttgc tgcacaggct 781 ggtgccagac atgtatatgc agttgaggca tctgaaatgg ctgaacatgc tcagcgtctt 841 atttctggaa acccatctct tggacaaaga ataacggtca tcaaaggcaa agttgaggaa 901 gttgaacttc cagagaaagc tgacatactt atttcggagc ctatgggaac cctcttggtg 961 aatgaaagga tgctggagtc ctatgttata gctagagaca gattccttgt gccaggtggt 1021 aaaatgtttc caacaactgg aaggattcat atggctccat tttccgatga atacctctat 1081 gttgaaatgg caaacaaggc tctcttctgg cagcagcata acttttttgg tgttgatctt 1141 acacctttgc atggttcagc attccagggg tatttttcac agcctgtggt ggatgcattc 1201 gatccaagat tattggtttc tccgcctacg tttcatacgc ttgatttcac taccatgaag 1261 gaagaggagc tttacgagat tgacattccc ctaaattttg tggcctctgt tggcactagg 1321 gtgcatgggc tagcttgttg gtttgatgta ttgttcaatg ggagcactgt ccagaggtgg 1381 cttaccactg ctccaggctc ccctacgact cactggtatc aactacgatg catactttca 1441 cagccattat atgtcatggc aggacaagaa ataacaggac gacttcatct ggtagcccac 1501 agtgcacaaa gctacacgat atacttgacg atgtcagcta aaatgtgggg tgagggggca 1561 gaacaaggtg gcatcctgca gacatccaca gccaaacttg aactcaagga gccatactac 1621 aggctgtctc aaccacaacc atatgtgatg caacaagacc agcagcagca gcagttacca 1681 tctttgcagc cacagagtcc tctctgggac tatcactacg gacaagatta gttgtctggc 1741 ctcagctatt gaacattggc aagaatagca gggatctgag cagcagatgc aagatggtct 1801 tagccctagt ataacgattg aaccagacca agactcggcg gccttcacta gatagctcgt 1861 aagccggagt tgcttcaggc aaacaactcc aggcctgtac aacagtatgc tcctacctga 1921 tgttgctagg cgttagctgt cagtggctaa cattgcattc gttgtgtacg agaggttgtg 1981 cagctgtagc taattgtgct cgtgtctgca ccgttattta aagggggtca aatacaataa 2041 gtgtatctgt ttgcaggaaa agctcaacga caaaggcgtc taactagaac gattgttgtg 2101 tatgttctta tgtattattg ttttatttaa tttaaaaatg gttggtcg //