LOCUS AK064924 2218 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013000N15, full insert sequence. ACCESSION AK064924 VERSION AK064924.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2218) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2218 /clone="J013000N15" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2218 /db_xref="Osa1:LOC_Os05g03610" /note="(Rice Genome Annotation Project) phospholipase C, putative, expressed" /note="mapping to R05-TIGRv4S1-000086F (Chr.5: short arm=1513967, long arm=1519589, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 528 a 575 c 684 g 431 t ORIGIN 1 gggtcatcac ggatcaagaa gaagattagc ttagctagct aaaaagtaag tagccgtgcg 61 aagtcgccgg cggtgatcag ccggcgatga cgacgtacag ggtgtgctgc ttcctgcggc 121 ggttcagggc ggcgtcgaac gagccgtcgg aggagctcgg cgacgtgttc caggcgtacg 181 ccgacggcgg cggcggcgtg atgggggagg aggcgctgag gcggttcctc cgggaggtgc 241 agggggaggc cgccggcggc ggcgacgacg agctggaggc gacggcgagg gaggtgatgg 301 ccttcgcggc ggagcagagg ctgctcagga agggcggcgc cgctgccgcc ggcggcgggc 361 tcaccgtcga gggcttccac cgccggctgt gcagcgacgc caacgctgca ctggatcctc 421 agaaacgggt atatcaagac atgggattgc ctctgtcaca ctacttcatc tacacggggc 481 acaactcata cctgacgggg aaccagctga gcagcgggtg cagcgaggtg cccatcgtga 541 aggccctcca cgacggcgtc cgtgtcatcg agctcgacct ctggcccaac gctgccaagg 601 acgccgtcga ggtcctccac ggcaggacgc tgacatcgcc agtgggtctg atgaaatgcc 661 ttgaggccat cagggagtac gcgttcgtcg cctcccctta ccccgtcatc ctcaccctcg 721 aagatcacct cactcccgac ctccaatcca aagtcgccaa gatgatcaag gagacgttcg 781 gtgacatgct ctacgtctct gaaactgaga acatggcgga attcccttcg ccggacgagc 841 tcaaggggaa gatcatcgtg tcgacgaagc cgcccaagga gtacctccag accaagaacg 901 acgccgacgc cgacgaggcc ggcgtctggg gcgaggagat caccgacgac aaggtggcgg 961 cgacggcgat gacgacagaa gagaaatgcg cggcggcgga ggaagcagtc gccgccgccg 1021 ccgtcgacga ggagatgcag gaggccgaga cggacaagaa gacgcagcac ggggtggaca 1081 acgagtacag gcgcctcatc gccatccctc tgacaagaag aaagcacgac atggatcagg 1141 acctcaaggt cgatcccgac atggtgacgc gcctcagcct cggggagaag gcctacgaga 1201 aggccattgt cacccatgga gctcacatta tcaggtttac gcagaggaaa ttgctgagga 1261 tattccctcg gtcgacgcgc attacgtctt cgaattataa tcctttgatg ggttggaggt 1321 atggagttca gatggttgca gcaaacatgc agggccatgg aagaaagctg tggctgactc 1381 aggggatgtt ccgagcaaac ggcggttgcg gttacgtcaa aaagcctgat attctgatga 1441 acaacgatcc agataaactg tttgatccta catccaaact accagtaaag acaagactaa 1501 aggtgacggt gtacatggga gacggatggc gattcgactt ccgcaagaca catttcgaca 1561 aatgctcacc cccagacttc tatgcaaggg tgggtatagc cggagtagaa gcagacacga 1621 ggatggagca gacgaaggtg aagatggaca cgtggattcc ggcatgggat cacgagttcg 1681 agttcccgtt gagcgtgccg gagctggcgc tgctccgggt ggaggtgcac gagtccgaca 1741 accaccagaa ggacgacttc ggcgggcaga cctgcctgcc ggtgtgggag ctccggcgag 1801 gcatccgctc cgtcaggctc tgcgaccacc gcggcgagcc cctccgctcc gtcaagctcc 1861 tcatgcgctt cgacttcacc tgactactcc atcttcttct tcatcatcgt catcgtctta 1921 gtagtagtag ttccatgtat gatatcatga gggatgaagc attgatcgta ctttctccgt 1981 cccgaaatat agcaatgtag gattagatgg aaacatctta atactacgaa tctggatatg 2041 tcctatctgg ttctggtttg ctatgtttta ggacgaatat agtacataaa attttagaag 2101 ttttgtttta aaaaagaata aattttgtgc gaaacggaag gtgtgattgt acattttgta 2161 cgtacattgt ttgttgttga ttaataaacg tgttaataaa agagggaagg attctttt //