LOCUS       AK064884                2017 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013000K07, full insert
            sequence.
ACCESSION   AK064884
VERSION     AK064884.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2017
                     /clone="J013000K07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2017
                     /db_xref="Osa1:LOC_Os05g04340"
                     /note="(Rice Genome Annotation Project) glycogen synthase
                     kinase-3 homolog MsK-1, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000101R (Chr.5: short
                     arm=1952090, long arm=1955860, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          534 a          472 c          465 g          546 t
ORIGIN      
        1 gtctccctcc gaatcctccc ccgcattccg cgccggagct gaggagggac agcgagccag
       61 cgagggaggt ggggcaatcc agcgagcgcc agatcgtgcc gccagccccg ctccgtcctc
      121 tctccggcga ccctccgccc cgcctgatcc cgtggtggat caactacaac tcatctttag
      181 gaaagcctct tgaacattag ccttgtgtgc ctttcaacag tatggcctcg gtaggtgtgg
      241 tgcgttcttc cttggggttt gagaacgaaa caagtacaag tggcgatgcc gaccgacttc
      301 cgaatgagat gagcaatatg agtataaggg atgataataa ggacattgac gacatagttg
      361 tcaatggcaa tgggacagaa cctggtcatg ttattgtgac aagcattgat ggaagaaatg
      421 gacaggctaa acagaccatt agctacatgg ccgagcgtgt cgtaggtcat ggatcctttg
      481 gaactgtttt ccaggccaag tgcctggaaa ccggtgagac tgtggctata aagaaggttc
      541 ttcaagacaa gagataagaa ccgtgagctg caaacaatgc gagttcttga ccacccaaat
      601 gtggtgtcac taaagcattg ttttttctca aagactgaga aggaggagct ttacctcaat
      661 ttggtgcttg agtatgtgcc agagactgct caccgtgtaa ttaaacatta caacaagatg
      721 aaccaacgca tgccattgat atatgcaaaa ctatacatgt atcagatatg cagagctttg
      781 gcgtacattc acaacaccat tggcgtgtgt cacagggata tcaagccaca aaatcttctg
      841 gtgaacccac atactcatca gctgaaatta tgtgacttcg gcagcgcgaa agtcttggta
      901 aaaggagaac caaatatttc ttacatctgt tcaaggtact acagagctcc agagctcata
      961 tttggtgcta ctgaatacac aacagcgatt gatgtttggt ctgccggttg tgtgcttgct
     1021 gaactcctcc tggggcagcc tctattccct ggcgacagtg gcgttgatca gcttgttgaa
     1081 atcatcaagg ttctgggtac ccctacacga gaggagatta agtgcatgaa cccaaattac
     1141 accgagttta aatttccgca aatcaaagct cacccatggc acaagatctt ccataaaaga
     1201 atgcctgctg aagcagtcga tctcgtctcc aggcttttgc agtattcacc atacctccgg
     1261 tccactgctg tgagtgttgt cgttgcacta tttgagccaa caccattttt tagagaaagt
     1321 tttagttctt ggcatcacta ttgtgttaca tttttctaat tacttcatca tacaaacatg
     1381 cactgccttg ccaagtacta gtagttacag attgtgcatt tctttatttg ccattacagt
     1441 cggaagcatt gatccatccc ttcttcgatg aactccgtga tccaaacacc cgcttaccga
     1501 acggccgttt ccttcctcct ctcttcaact tcaagcccca tgaactgaag ggtatgccaa
     1561 tggaattcct ggtgaagctt atccccgaac atgctcgaaa gcaatgcgcg tttgtaggat
     1621 ggtgatttct gaggtcagca tgaaaactag ttcagaattt cttcaccgtc ctccattaga
     1681 aagcagagat gaaccctgtg tgcagccatt tgggaaagct ggtgcatatg gaagtggaac
     1741 tacatttttt tgtccgagat tctgacgccg cgtattcttt tcccccctca cactttgctg
     1801 ctgccggtgt aaccaaaaaa tcatccacgg ttctgtaaag ttgatgaaga agagtgtaaa
     1861 atcaggttga aaactgaatt cgatcggttt gtcaagattg tagcaacatg caaggaagga
     1921 tgttgcacac tttgtatggc aatgttcgtt cggtccaaat atttggacat ggatcgagag
     1981 gctattcatt taattgtact tgctgctaca tgttctt
//