LOCUS       AK063919                1402 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-123-B07, full insert
            sequence.
ACCESSION   AK063919
VERSION     AK063919.1
KEYWORDS    oligo-capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1402
                     /clone="001-123-B07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1402
                     /db_xref="Osa1:LOC_Os10g05690"
                     /note="(Rice Genome Annotation Project) auxin
                     transporter-like protein 3, putative, expressed"
                     /note="mapping to R10-TIGRv4S1-000093R (Chr.10: short
                     arm=2833780, long arm=2835182, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          356 a          330 c          283 g          433 t
ORIGIN      
        1 atgtctagaa agcaacaaaa ataaagcttt cagcaacagc atcatcacag tatactagta
       61 gcagtagaat accatcattc acctaatgac ctacttgtga catcatccca atgcaagctt
      121 aacttatctt tgcataatct ttaatttctt cctgatctgc atccatatac tgttctgttt
      181 gattctgaaa cagtacatac aatacataca gttgcatgtt ctgtttcgta taattcggta
      241 acagtagtat aataactcaa acatatataa ttaagtaaag gtgcaatatt attagacttt
      301 tgcataatct tttctttctg atccctgcat tcatatatac tgctctctgt tggattcttg
      361 aacagtaatc taactgaaaa ttataattag agcaagttta atagtatagc taactgctga
      421 ctctaaatta tctatagtta acttaatagc caattaatag ccaattcata caatagttac
      481 ctataaacat atactacata atcaatattt ggtcccacct gtcatacaca tatgcatttt
      541 acagtctgtg ctgtagctgg cttacaaatc tgtaacccgc tactcttacc tctactcttt
      601 tatcttcttg aaatatgctt atagctgact tatagtcagc tattgtacct gctatcacga
      661 gatgatagta attaataact gattggattg gattggattg cagaacgcgg tggagcggcc
      721 gccgaggttc gccggaggat ggacgggggc gtacgtgata aactcgttcg tggtggcgtg
      781 ggtgctggtg gtcggcttcg gcttcggcgg gtgggcgagc atcaccaact tcgtccacca
      841 ggtcgacacc ttcggcctct tcgccaagtg ctaccagtgc ccgcctcacc ccgccgccgc
      901 cgccctctcg ccgccgggtg ccatcgctcc ggcgccggcc tcgatgctgc cgccgttcaa
      961 ctccaccgcc gccggcatct ttgccgctcc ggtgccgtct cctgctccgg ctccggcacc
     1021 gatgcatttc gtccttggtc accaccacca tcaccggcac caccgccacg gcctctagct
     1081 aattaatcga gatcaatcaa gatcatgatt atcagaggtt gggtttgcat tattgcacta
     1141 gtttttagtg agctactagc tagttgatca tcactgcaag attgttaatt agcgctagta
     1201 attagtaaaa gtaagcctct tttcctaatc ctattgtatg ctttgcttct ttcttcttct
     1261 tctggttact gagagagagt gagagtgaga atgtttggtg gtggggtatg catgtcagag
     1321 acacgtttca agtctctcgt cttgtaatgt gtcctttttg tgtggagctg cttttgagaa
     1381 agaaagaaga gagatcaaat tt
//