LOCUS       AK063458                2206 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-115-G09, full insert
            sequence.
ACCESSION   AK063458
VERSION     AK063458.1
KEYWORDS    oligo-capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2206
                     /clone="001-115-G09"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2206
                     /db_xref="Osa1:LOC_Os05g12150"
                     /db_xref="RAP-DB:Os05g0212300"
                     /note="(RAP Annotation release2) Similar to
                     Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)"
                     /note="(Rice Genome Annotation Project) endoglucanase 1
                     precursor, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000307R (Chr.5: short
                     arm=6921209, long arm=6923907, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          421 a          662 c          714 g          409 t
ORIGIN      
        1 aagccaacca aagtcctctg ctcccctgct ccttcactct gcttcactct cactcactca
       61 ccttcttggt acattgcaat tttgcaatgg ccaagaatgg tggtgctcac ggtgcagcca
      121 cattgtttgg tctcttggca cttgcatcaa tggtgaagct gggatttgtt gctgggggtg
      181 gccatgacta tgccatggca ttgaggaaga gcatcctcta cttccaggcg cagcggtccg
      241 gcgttctccc tcctaaccag agggtctcct ggagagccag ctctggcctc tttgatggaa
      301 aggccaatgg agttgatctt gttggaggtt attatgatgc aggggacaat gtcaagtttg
      361 ggttgccaat ggcgttcacg gtgaccatga tgtcgtggag catattagag tacggcaagc
      421 agatggcggc ggccggcgag ctccggaacg ccatggacgc cgtcaagtgg ggcaccgact
      481 acttcatcaa ggcgcacccg gagcccgacg tgctctacgg cgaggtcggc gacggcgaca
      541 ccgaccacag ctgctggcag cggccggagg acatgacgac gagccgccag gcgttccgcg
      601 tcgaccccca gcaccccggg tcagacctcg ccgccgagac cgccgccgcc atggccgccg
      661 cgtccatcgt cttccgcggc acgtaccctg gctacgccaa cctcctcctt gtgcactcca
      721 agcagctgtt cgagttcgcc gacaagtacc ggggcaagta cgacgccagc atcacggtgg
      781 cgcgaaacta ctacggctcc ttcagcggat acggggacga gctgctctgg gcggcggcgt
      841 ggctgttcga ggcgacggag gacaggtcct acctggagta cctcgccggc aacggcgagg
      901 cgctgggcgg gacggggtgg tccatcaacc agttcgagtg ggacgtcaag taccccggcg
      961 tgcaggtcct cgccgccaag ttcctcctcc agggccgcgc cggcgaccac gccgccgcgc
     1021 tgcagaggta caggcagaac gcggagttct ttgtgtgctc ctgcgtcggc aagggcgccg
     1081 tcaacgtcgc caggaccccc ggcggcatga tgtaccacca gaggtggaac aacctccagt
     1141 tcgtcaccag cgcctccttc ctcctcaccg tctacgccga cttcgccgcc atctccggcc
     1201 gcggcgccgt ccactgcccc gccggcgccg cccaaccatt cgacatcctc aaattcgtca
     1261 aatctcaggt gaattatatt ttgggtgata atccgagggg gacgagctac atggtcgggt
     1321 acggcgcgag ctacccgcgg caggtgcacc accgcggcgc gtccatcgtg tccatcaaga
     1381 gggacccgtc gttcgtgagc tgccaggagg ggtactcgtc gtggtacggg agggaagccg
     1441 gcaacccgaa cctgctcgac ggcgccgtcg tcggcgggcc cgacgagtac gacgacttcg
     1501 ccgacgagcg cgacaactac gagcagacgg aggccgccac ctacaacaac gcgccgctgc
     1561 tcggcgtcct cgcccgcctc gccgcctcct gcggcggcct caaggaggag gaatacgaac
     1621 aagaaacggc gactccggtc gtgaaccgga cgtcgtcgtc gtcgtcgctg ccggcgacgg
     1681 cgacggcgat cgggatcgag cagaacgtga cggggacgtg ggcgaggagg cggaggacgt
     1741 actaccggta cgcggtgacg gtgacgaaca ggtcgcgggg gaagacggtg agggagctgc
     1801 acctgggcgt gtcggggctc cgggggcggc tgtgggggct ggaggaggcg aggtacgggt
     1861 acgtgccgcc gaggtggctg ccggcgctgc ggccggggag gagcctcagg ttcgtgtacg
     1921 tgcagccggc gccggcgccg gcgaacatct gggtcaccgg ctacaaactg gtctgaaatg
     1981 aactcaagta ctcaactatt ctgaaatggt aatttgtggt agagagagag tagagtgtgg
     2041 ttatttggag gaagtagaga agagtccaag gaacgcgagt acgtatactc atcctcttcc
     2101 tcctcgaata ctatgatttt aggggtttgg agagatgaga tttagttgtt catcgtcctc
     2161 cttttgccct atcaagttta attaagtaac tattaatatg cgactg
//