LOCUS       AK060423                1497 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-010-H01, full insert
            sequence.
ACCESSION   AK060423
VERSION     AK060423.1
KEYWORDS    oligo-capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1497
                     /clone="001-010-H01"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1497
                     /db_xref="Osa1:LOC_Os05g39770"
                     /db_xref="RAP-DB:Os05g0475400"
                     /note="(RAP Annotation release2) Similar to
                     Alanine:glyoxylate aminotransferase-like protein
                     (Fragment)"
                     /note="(Rice Genome Annotation Project)
                     alanine--glyoxylate aminotransferase 2 homolog 2,
                     mitochondrial precursor, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000826R (Chr.5: short
                     arm=23272962, long arm=23275244, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          388 a          332 c          409 g          368 t
ORIGIN      
        1 aaatgcagta cctgttcgac gaggatggcc gccgttacct ggatgctttt ggtggcattg
       61 caaccgtttg ttgcgggcac tgccatccgg atgttgttga ggcgatggtc aaccaagcaa
      121 agaggataca acactccaca gttctttacc tgaatcatgc tattgcagat tttgccgagg
      181 cattggcagc caaaatgcct ggtgatctga aggttgtttt cttcacaaat tctggcacgg
      241 aggcgaacga gcttgcactg atgattgccc ggctttacac tggttgccat gacattattt
      301 cactcaggaa tggataccac gggaatgcgg ctggaacaat gggtgctacc gctcaatgca
      361 actggaaatt taatgttgtt cagacgggag tgcaccatgc acttaatcca gacccatata
      421 gaggtgcttt cggttctgat ggcgaaaagt atgcccgaga tgttcaggaa atcattgatt
      481 ttggaactac aggaagggtc ggtggtttca tttcggaagc catacaggga gtgggtggaa
      541 tagtggaact ggcaccagga tacttgcctg ctgtgtacaa tatggtaagg aaagctggcg
      601 gcctctgcat cgccgacgaa gttcaggcgg gagtcgcacg aactggaagc cacttctggg
      661 gatttgaatc gcacggcgtc atcccagaca tagttacaat ggcaaagggt ataggcaatg
      721 gcataccgat cggagcagtc gtcacaaccc ctgagatcgc tcaggtgtta acccgcagga
      781 gctacttcaa caccttcggt ggcaaccctg tcagcacagc cggtggccat gctgttctca
      841 aggttctgga gaaggagaag ctccaggaga acgcatttgt ggttggctcc tacctgaagg
      901 aacggctcaa caagctgaaa gagaagcatg acatcattgg tgatgttaga gggaaaggct
      961 tccttcttgg ggttgagctg gtgaccgatc gccagaagaa gacaccggcc aaagttgaga
     1021 tcggtcatgt catgaaccac atgaaagaca tgggtgtgct ggttgggaaa ggtggtttct
     1081 acgggaacgt gttcagagta acacctccac tatgcttcac caaagaggac tccgatttct
     1141 tcattgaggc gatggacatt tcactatcga agctgtgagt cggagaggga ctggcaggat
     1201 caacctgtcc gcatgtgatc cgtatccata aataatgttg gggattggtg agatagcacc
     1261 tcgttgtctc gtaatatgtc ctgcaaaccc accatgcgct gctcaacaca tggtccaata
     1321 ggcgctcctc cggtctctaa tcagatgtgt tgtgactcgt gaccaataag cgcatgtcaa
     1381 tgtcagatgt attgttatag ttattgttta catgctgaac gacaaaacga accaatcaca
     1441 atgcccaggc gatgtaaatg ttgaaacaat tatattggca aatgtcagtg atttcgc
//