LOCUS AJ491820 1587 bp mRNA linear PLN 02-JUL-2003
DEFINITION Oryza sativa Japonica Group mRNA for putative sodium transporter
(hkt3 gene).
ACCESSION AJ491820
VERSION AJ491820.1
KEYWORDS hkt3 gene; sodium transporter.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Rodriguez-Navarro A.
JOURNAL Submitted (27-JUN-2002) to the INSDC. Rodriguez-Navarro A.,
Biotecnologia, E.T.S.I. Agronomos UPM, Ciudad Universitaria s/n,
Madrid E-28040, SPAIN.
REFERENCE 2
AUTHORS Garciadeblas B., Senn M.E., Banuelos M.A., Rodriguez-Navarro A.
TITLE Sodium transport and HKT transporters: the rice model
JOURNAL Plant J. 34(6), 788-801(2003).
PUBMED 12795699
FEATURES Location/Qualifiers
source 1..1587
/organism="Oryza sativa Japonica Group"
/cultivar="Nipponbare"
/mol_type="mRNA"
/db_xref="taxon:39947"
CDS 19..1548
/gene="hkt3"
/product="putative sodium transporter"
/db_xref="GOA:Q8L481"
/db_xref="InterPro:IPR003445"
/db_xref="UniProtKB/Swiss-Prot:Q8L481"
/protein_id="CAD37187.1"
/translation="MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIID
ILGFVSLVVLRPSNHKYNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMF
LDSKMFLSFLGLVLESSKQNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKR
CLKYLVFVVLAYMIIILVTGSLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFT
NGGLLPTNESMVVFSSNNGLLLLLIGQILAGSTLFPVFLRLVIWALRGLRLAKAEEPD
FMMNNSSAVGFSHLLPNLQTIFLAVVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKIT
NALFMAVNARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKRIGPESDD
RTSKGKPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFNIIFEVISAYGNI
GLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLNSKDSTSART
R"
BASE COUNT 405 a 375 c 350 g 457 t
ORIGIN
1 ctctgccctc tatctccaat gcctattcgg ctgcatatct ttgtcaattc tgcaaggcat
61 gccatcaact catcggcatt catttgtcgg ttcatcgcat accatcttag cccgcttttg
121 attcacttat cctattttct tatcattgat atacttggtt ttgtttcctt ggtggtgctc
181 aggccaagca accacaagta caatcctcgc tatgttgata tgtttttcct atcgacatct
241 gcagttacag tcataggatt agccaccata caaatggagg atctttccag ctctcagata
301 gctatcctga ctctcttgat gttcttagac agtaagatgt tcctttcctt tcttggcctt
361 gtccttgagt caagcaagca aaacaagcat gatcctgaaa accgtagagt cagttcagtt
421 actgtgtgca agcaatcaca gctagaagag gcgactcccc aaactccatc catgaactcc
481 attgatatca agaagagatg cctcaaatac ttagtgtttg tggtgctggc atacatgatc
541 attattcttg tcactggttc tctattggtg ttcatgtaca tagctcatgt ttcaagtgct
601 agagatgtgc taacaaggaa aagcatcaac aaagctctct tctcgatatc ggtcacagtc
661 tcctcattca caaatggagg gttattgccg acaaatgaga gtatggttgt attctcctca
721 aacaatggcc tcctgttgct actcattggc cagattcttg caggcagcac actgttccct
781 gtgtttctga ggttggtgat atgggcattg agaggactaa gattagcaaa agctgaagag
841 cctgacttca tgatgaacaa cagcagcgca gtaggtttca gtcacctgct gcctaacttg
901 cagacaatat ttcttgcagt tgtggaggtt gcttttgtag ccatgacagt catcctcttc
961 tgctgcttga actgggattc tgtagtgttt gcagggctca gctccctcca gaagataacc
1021 aatgcattgt tcatggcagt gaatgcaagg caggcaggag aaaattccat tgattgttcc
1081 cttgttgcgc cagcggcttt agtactattc atggtcatga tgtacactcc atccttgaca
1141 aagttgttct cagcatgtca agatcacaaa cgaatcggcc cagaaagcga cgatagaaca
1201 agcaagggga aaccattcct gaagatgatg gcattttcac cactcggctt caacaccaca
1261 gtgataatgc tggtctgcat cactgaaagg agatcactct ccactgaccc tctcaattta
1321 tccacattta acatcatctt tgaggtgata agtgcctacg ggaacattgg gttgtccact
1381 ggctacagct gctcgaggca gctgcagcac caggagggga ttgcctgcca tgagaaggcg
1441 tacaacttct cggggtggtg gagtgaacca gggaaactga ttcttgttct tgcaatgctc
1501 tgcgggaggc tcaactcaaa ggattccaca agcgcacgaa ctaggtgatg atgatcagaa
1561 gcgatcagta tgcgatcgat gttctgc
//