LOCUS HPAC002058 7929 bp DNA linear HTG 15-MAY-1997
DEFINITION Helicobacter pylori, *** SEQUENCING IN PROGRESS ***.
ACCESSION AC002058
VERSION AC002058.1
KEYWORDS HTG; HTGS_PHASE2.
SOURCE Helicobacter pylori
ORGANISM Helicobacter pylori
Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
Helicobacteraceae; Helicobacter.
REFERENCE 1 (bases 1 to 7929)
AUTHORS Clifton,S., Reece,A. and Roe,B.A.
TITLE Plasmid clone from H pylori ATCC 49503 library
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7929)
AUTHORS Drazek,S.E.
TITLE Plasmid H pylori ATCC 49503 library
JOURNAL Unpublished
REMARK This address is E. Susan Drazek's former address.
REFERENCE 3 (bases 1 to 7929)
AUTHORS Clifton,S., Reece,A. and Roe,B.A.
TITLE Direct Submission
JOURNAL Submitted (15-MAY-1997) Department Of Chemistry And Biochemistry,
The University Of Oklahoma, 620 Parrington Oval, Room 208, Norman,
OK 73019, USA
COMMENT * NOTE: This is a 'working draft' sequence.
* This sequence will be replaced
* by the finished sequence as soon as it is available and
* the accession number will be preserved.
FEATURES Location/Qualifiers
source 1..7929
/organism="Helicobacter pylori"
/mol_type="genomic DNA"
/db_xref="taxon:210"
BASE COUNT 2840 a 1377 c 1316 g 2396 t
ORIGIN
1 gatcaaactc gcaatagttg aatcgatacc tagtccccct tgattgatgt tttgtatagc
61 aacagagggc gttatggtca aattgaatgc caataatgcc aaaacaccaa agagcaaaat
121 aggaatagct agaactagga taaacaaatt attgataaac catatcaata tgtttttcat
181 agaatctttg aaccaatcta gcacgatcaa acataccgca atagggaaca caataccgct
241 aaaagcccca gctatcaaag gtttcacaac cacagtgctt attctcataa tgatagttac
301 ttgcataaaa atagcaaata aagaaatacc tgccacttgc aagccttgta acaaactagg
361 agcgttgttg ccaacattag aaaaaacagc tcttactgca ggtaaaattg aattaacagt
421 gtaattcagc actaaatcta aagcccaaaa aagaacttga ttcagcccaa aagcgcctgc
481 taaaccaaaa taaatagaat aagagatttt ataaagataa ccaaaacctg cataggcgat
541 aaaagagacc atcgccattt tgaataatgt ccccccaaca aatcgcatgt attcaaaacc
601 tatgttaatc tgaatgttac ttgaaatatc cctcaatttc ataaaagaaa taaaaacaaa
661 aatcccaaaa acaatataaa tcaggtaaga aacaaaatca agatatgacc cttgccctat
721 gataatatca ggcagattga ctacaccata tgcaggaaga acagcagcgt ccgctccttt
781 gacaacagat tctaatgcgg caaaagcaag catggctgta gtgttgtttt gcagtttatt
841 tgcagtgaat tctttaccaa tcagccaaat taaaccatca gctgtaatat tcgtagaagc
901 ttgagcggtt attgagccaa ttatttgtaa aagaatattg cctttcacat tgtcctcaac
961 accgcctttg gtaaaattct gaatcttgtt gctcaaattg tctagcacgc tatccatgga
1021 tacatctatg tttttattta tcaatgcgtt ccaaccaaaa ttacagccac ttgatggcgt
1081 tagagcaaaa ccttgtatag ctgtagcaac acttgcccac gctgatcccc ataaaggacc
1141 taaagtattc aaatatttca ccagattgct agcggctaaa cttgtggcta atggtgtgct
1201 aagcgcttcg atcacaccct gccctgaact ctttccactc cctgatgcac caatagacgt
1261 atagcctgtc aaaatatctg caaaactttt gttggttaaa acataactcg gtatcagcat
1321 gcaataaact gtttggtaaa ttttgagatt ggaaacaatg ggcaaatcaa tagctttcaa
1381 ccaattagga acaatgagaa aaaaacttat gatcgttatt aaaaaagtcc ttttaatatt
1441 aaacatgctc ttattgtttt aatgccttat tttttgattc cacttcttta atctttctca
1501 aaatttcgct taccgtctgt tcgttttgta aatctgtgat ttgaatgtca aacactttga
1561 agccaaaagg attgatgata agattttctt gagaagagtt acctctagca aaatcataat
1621 aaatagttac ttgtttttta gtgatatatt cataattttc cattgtatca ggcgtgattt
1681 tgatggtaat gaaaaatgtt aatctcgtta agggactatt tttgactttt tctctttgta
1741 tgttagagct aatgatagct tctgctcgga ctttatctac gaattgtctg atattttcat
1801 tgaacattct cattgcttgg gtttggaaac tcacatcgca atactgcatt agttgatcct
1861 tgcgatccct caaagaattt ttgctataac caaacagcaa tgagacaaat tttgaagttg
1921 cactatccac aacggcttca gaattgacga tttgcctagc atcggagcgt ttgacgattt
1981 taaattctcc tgtgtatcga tcaatgccat aaacaaatat atccgttttc ttcaaaggca
2041 tcatcatcac aatactcgtt acagcggcga cattgagtgc catagagaga taaaaagccc
2101 ttttgaaagt cctattggcc ttattgagtt ttgccaatct atcaagggct atcacacccc
2161 caaccaaatt ttcatcaatc aagacttcct cgtttttttt ccctaacatg cgacagcttt
2221 attgtttagt tattggttcg ttggttgtaa aacttgagaa atacttgaga aattttttca
2281 tcaaaaactc cttaaaacaa tctcagttat agtatagcaa aatttctgta aaaattatat
2341 atttgaaaaa aacctttaac aaaaaccttt ttggataagg cgttgaacaa agattcctta
2401 taatgaatgt aagtagcgga ttgcttcaaa caagaaacaa gatgaaatac gatgcaactc
2461 aaaaagtaag agcaatgagt aagcagtcat aactcagtaa tgaaatttta gaagcaccta
2521 attcaaagag ataagacaat cacaactcag agagagaatg gtataataac aaaacaattt
2581 ctcaatttaa ttcttgaaag gaatttcatg aacgatacaa cagagcatca tggatccaat
2641 tcgctaaacg ccccatcacc tagcgactca cagagcaatg atctcttaaa tttgctagac
2701 tcattatatc ccaaagggag tttaggggaa caaagatttc acgaagcttt aaagaatcaa
2761 gaagagttga aaaatatcct gatagaaata gaaaagctgc cgcaagaaaa aaggtatgaa
2821 cttctgatgc agataggaca agccaaacag aaaataatgg aggcatacgc tcattcattc
2881 ttaggatata tagggggact agagcatctg ttaggattat gtatgggtgg gatatttgtt
2941 ttgtttgcaa tctattttgt atttttaaga actagcaaaa acatggagct agtggaaagt
3001 ctaaaaacaa aactaaaact tcagtatttt tactatgcct ttggtgtagg tgcggttttg
3061 ttttttggat tagaaacaat tagatctatt tatgaactat atatattagg aattggtagc
3121 actaacgaca aggtgctctt tgttttgaaa aacatttgct tcataggtat gggctatttg
3181 atttataaag ttattaaggt tattggtata aaaaatttta tcaatggtct tttcacttca
3241 aagaaacaag agcaataagg agaaacaata atgaaaatga gagcaagtgt tttaatcggt
3301 gcgacaattc tgtgcttaat tttaagcgca tgcagtaatt atgcgaaaaa agtggtgaaa
3361 caaaagaacc atgtttatac gcctgtgtat aatgaactga tagagaagta tagtgagata
3421 cccttaaatg acaagctcaa agacacacca ttcatggtgc aagtgcaagt tgccaaatta
3481 caaggactat ttgttggata ataaacaagt tgtactaact ttcaaacttg ttcaccattc
3541 taaaaagatt acgctcatag gcgatgccaa taagatcctt caatacaaga attacttcca
3601 agctaacggg gcaagatctg acattgattt ttacttgcag cctactttga atcaaaaggg
3661 tgtggtgatg atagcgagta actacaatga taatcctaac aacaaagaaa aaccgcagac
3721 ctttgatgtg ttgcaaggaa gtcagccaat gctaggagct aacacaaaaa acttgcatgg
3781 ctatgatgtg agtggagcga acaacaagca agtgatcaat gaagtggcaa gagaaaaagc
3841 tcagctagaa aaaatcaatc agtattacaa gactctctta caagacaagg aacaagaata
3901 taccactagg aaaaataacc aacgagaaat tttagaaaca ttgagtaatc gtgcaggtta
3961 tcaaatgagg cagaatgtga ttagctctga gatctttaag aatggcaact tgaacatgca
4021 agccaaagaa gaagaagtta gggagaagct acaagaagaa agagagaatg aatacttgcg
4081 caatcaaatc agaagtttgc tcagtggtaa gtgattggaa gaaaaaaggg agagagtata
4141 agggtagaga acaacgccaa taggcgttag ccttacttga caggtaaggc gatcaattag
4201 gtaatctttt taaagcactc atcatttttt aatcctgtct ctgcctgaga cgaatacttt
4261 tcaaactgaa ttttgttagt tacaccgaga ttttttgttc gttttccaca tcaagcattt
4321 tgcactcctt tttctttcat gtatttttca agatcaaatt tcatcagcag atctctaaca
4381 tagtcgttat attgttcaat ggtttttaga ttagcataga aattcacttc ttcatctgtc
4441 atcacaaaca atttcaatag tgggagctta gtgccataca attctatttg cgagtccatt
4501 tctctaatac tcatcttgaa catgatgggc ttactgaaga aaggcagaaa tattccaaga
4561 attgatcgat caaatttaga gaataagaaa ttaggattct ctgcaatggc atgcaacaac
4621 tccatagtct cactctcaag caatcgataa acctttttaa atttatcaac accatgcttt
4681 tgataacagc gcgataatct ttcatgtaat ttcttagaac cttatctaac acgctccttg
4741 tttgtatgca tctgtctgag aaatcatgca tggtgtttat ctgatctatg attttccttt
4801 tttcatcagt gtttaaaagt ttgttctcct gcaagctctc aataagtttt tctttcttat
4861 cttttgagtt gccaatcatt gagaagagtt ttcgcatgtt attactcata tcgctcttga
4921 tcctttccaa tggatttggt ttctctttag attattcaga tcgtaaaagt ttatattgaa
4981 attatacaat atctgttgtg tgaaaatctc agagcggcca taattcaaag agcaaaaaac
5041 tattttttaa ccataaaata ttgtttcaat cactcttata tctattttcc aaaacctaca
5101 aaaaacgctt tcacaaatag ccctaaaaac cgatttaaaa aagtcttaat gctattaaaa
5161 aagcaagatc ggtcgtaaaa atgcgtgaca actaaatggt caagataact caactttcaa
5221 aaaggagtct taagtaataa aatcataatg ttcagctagt aatctattgc cttgttgatc
5281 aaacaaagct ctgcgtgaaa gatgaaaaaa atttcacctt tagatagtta atacaccact
5341 agagtcttac ttgagagaca ctcattttat tagcggcttt gtctgatttg ctgctaccaa
5401 aaccattacc aaccaaagca gatcccatgt ttttgatact atcgaatcca ttcttcagca
5461 cttctgccat aaaattcttg atattgccca taggcaagtt aaattttttc cctaatgctt
5521 cattaagtcc catcattaac atcagaaaga acaaaaaatt taatatcata gaaaacaaat
5581 cactggataa acctgtaaaa agatttggtc cgccacccaa caaagaagct aaaatttttc
5641 ccatactcag tccttttatt tttggttgtg taagttcttg cttgttcgga tctctaatgc
5701 gtgttttagg aggaagcatt tcacaatagc atacctaaag ctactaagaa aattcttgaa
5761 tctattggta agattactca tgaaatcaag cgataagtaa ccaccaatcg caaacaaatc
5821 aaatattctg ccaccaaaca agccatatcc tttttgtttt tatctcctaa ttatagcaaa
5881 tttttatcaa tattaatttg gaaaccacca ccatatcaaa aacaaattac taacacacta
5941 gatgtagaat tatttttaaa aaacgctcac ttaaatttaa aatcatgggg ttttaggatt
6001 tgaataccaa aaatagattg gttttttcaa ataagctagc tttgtgtatg cactcaaaaa
6061 gattttagtt tttagtcagt aaggttttat gctaatgtgg ggaaataaag aaatttctct
6121 aaatcaagtc ttgagaattt ttgacgaatc ataagaacca attttgccat tgagtcataa
6181 gcatgattag cttcattgtg aaatttgcgt ggcttaagag atagtatttg cttattatgc
6241 tgagagaaat gagtagcaaa agataagtag tgtaataaaa aaagctaggt tttattataa
6301 gagcaaacaa gaataatatc ggataaacta aaatcacccc tgccccataa gaaaaaagcg
6361 ctattaaaaa acctataacg atagagctga tattgaacag cctataataa aggctgtact
6421 tatctaaatg tttgttgaaa gaatgtttga attgtaagaa gttttgtttt aatttgctaa
6481 tcggttgttc cattttggtt tttaaagaaa tagttcaagg cggtgaacct ataaagaatc
6541 ataaaataat aaatatttta caaaaccacc ctaatctaac tccaaatctc aaagaatacc
6601 ccacttactg atactaacat gtggtatagc acaaaccaac gatctgtttg tttatgccaa
6661 aaaaagaaca gaaaatacct gttaaagaat aaaggagttt ttccatctaa aaaacacaaa
6721 tctattatat agaaataatc ttaagagaac ttaaaaaata ctaacaagcc gcatacaagc
6781 aagaaaaaca taacactata agacctagat tttccttacc ttttgggtat ggaaaaattt
6841 ggattcatag ttttgtaaaa attgtggtaa atgtttcccc attttttgaa attttaaggt
6901 tacaaaaact tataagatgc ttgcaaaaat cgtttttagc tcattggttg cgtttggagt
6961 tttgtcgcct aatgtggagc aatttggttc atttttcaac gagataaaaa aagaacaaga
7021 agaagtgcct ccaaaagaag acgctcttaa ggctcgcaag aagctcttaa acaatacgca
7081 tgatttctta gaagacttga tttttagaaa cccaaatcgc agagcttatg gatcatagag
7141 ctaaagtcct tttagactta gagaacaaat acaaaaaaga aaaagaggct ctagagaaag
7201 agacaagagg taaaatcctt actgctaagt caaaggctta tggtgatcta gagcaagcct
7261 taaaagataa ccctctctat aagaaactcc tccctaaccc ttatgcctat gttttaaacc
7321 aagaaacatt caccaaagaa gataaggagc gtttgagtta ttactacccc caggtgaaaa
7381 cgagcagtat ttttaaaaaa actaccgcta ccactaaaga taaggctcag gctttgcttc
7441 aaatgggtgt gttttcttta gatgaagaac aaaacaaaaa agcgagccga ttagctctat
7501 cttacaagca agcgattgaa gaatattcca ataatatttc taatttattg agcagaaaag
7561 aattggataa tatagattat tacttacagc ttgaaagaaa caagtttgac tccaaagcaa
7621 aagatattgc tcaaaaggct actaacacgc ttatttttaa ttcggaacgc ttggcgttta
7681 gcatggcgat tgataagatc aatgagaaat acttaagggg ctatgaggct ttttctaact
7741 tgttgaaaaa tgtcaaagat gatgtggaat tgaatactct gactaaaaat tttaccaatc
7801 aaaaattgag tttcgcgcaa aaacaaaaat tgtgtttgtt ggttttagac agcttcaatt
7861 ttgataccca atccaaaaaa tctatattaa aaaagactaa tgaatacaat attttcgtag
7921 atagcgatc
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