LOCUS AB505458 1720 bp rRNA linear ENV 16-JAN-2010
DEFINITION Uncultured eukaryote 18S rRNA, partial sequence, clone: RM1-SGM01.
ACCESSION AB505458
VERSION AB505458.1
KEYWORDS ENV.
SOURCE uncultured eukaryote
ORGANISM uncultured eukaryote
Eukaryota; environmental samples.
REFERENCE 1 (bases 1 to 1720)
AUTHORS Takishita,K., Kakizoe,N. and Maruyama,T.
TITLE Direct Submission
JOURNAL Submitted (28-MAY-2009) to the DDBJ/EMBL/GenBank databases.
Contact:Kiyotaka Takishita
Japan Agency for Marine-Earth Science and Technology; 2-15
Natsushima, Yokosuka, Kanagawa 237-0061, Japan
REFERENCE 2
AUTHORS Takishita K,K., Kakizoe,N., Yoshida,T. and Maruyama,T.
TITLE Molecular Evidence that Phylogenetically Diverged Ciliates Are
Active in Microbial Mats of Deep-Sea Cold-Seep Sediment
JOURNAL J. Eukaryot. Microbiol. 57, 76-86 (2010)
COMMENT
FEATURES Location/Qualifiers
source 1..1720
/clone="RM1-SGM01"
/country="Japan:Sagami Bay, off Hatsushima"
/db_xref="taxon:100272"
/environmental_sample
/isolation_source="microbial mats in deep-sea cold seep
sediment"
/mol_type="rRNA"
/organism="uncultured eukaryote"
rRNA <1..>1720
/product="18S rRNA"
BASE COUNT 491 a 315 c 417 g 497 t
ORIGIN
1 ttctcaagga ttaagccatg catgtctaag tataaatagt atacagtgaa actgcgaatg
61 gctcattaaa acagttatag tttacttgat aatcgaattt tatatggata accgtagtaa
121 ttctagagct aatacatgct gttaaacctg actttatgga aaggttgtat ttattagata
181 ttaaaccagc agcttcggct tctgtgatga tttataataa ctgatcggag tgaagctagt
241 cttcactaaa tcattcaagt ttctgcccta tcactttgat ggtagtgtct tggactacca
301 tgaggattac gggtacgagg aattagggtt tgatatcgga gagggagcct gagaaacggc
361 taccacttct aaggaaggca gcaggcgcgt aaattaccca atcccaactc ggggaggtag
421 tgacaagaaa taataactcg gatagttcta ctattacgag attaaaatga gaacaattta
481 aaaatcttaa cgaggaacaa aatgagggca agtctggtgc cagcagccgc ggtaattcca
541 gctcatttag tgtatattaa agttgttgca gttaaaaagc tcgtagtcga tcatctagtg
601 cttgccgtcg tggcttcggt cattgcgcgc gggtgctatc tgctcgagaa cttcatctaa
661 cttcactgtt cgatgttgct gatcgggcac tttcctgaga aaaaattaga gtgttcaaag
721 caggctaatg ccttgaatat tacagcttgg aataatagaa taagactgaa gtctcttttg
781 ttggttatga actttagtaa tggttaatag aaacaggcgg gggcattagt atttaattgt
841 cagaggtgaa attctatgat ttattaaaga ctaacttatg cgaaagcatt tgccaaggat
901 gttttcaatt gatcaagaac gaaagttagg ggatcaaaga cgatcagata ccgtcctagt
961 cttaactata aacgattccg actatggatc gggagggtct tccaagccct ttcggcacat
1021 tatgagaaat caaagtcttt gggttctggg ggaagtatgg acacaagtct gaaacttaaa
1081 ggaattgacg gaagggcaca ccaggtgagg agcctgcggc ttaatttgac tcaacacggg
1141 gaaacttact agggcaagac taaggttgga ttgacagatt gagagctctt tcttgattct
1201 tagggtggtg gtgcatggcc gttcttagtt ggtggagtga tttgtctggt taattccgtt
1261 aacgaacgag acctcaacct gctaaactag gagccgtatt actcatacgg tttccttctt
1321 agagggacta agtgttcaag cactgggaag tgaggcaata acaggtctgt gatgccccta
1381 gacgtcctag gccgcacgcg cgctacaatg acacgttcaa cgagtttctt cctggtcctg
1441 acggactcgg gtaatcttca tagtacgtgt cgtgctttgg gatagtcctt tgcaattata
1501 ggacttaaac taggattacc tagtataggt aagtcatcag cttgcctaga ttatgtccct
1561 gccctttgta cacaccgccc gtcgctccta ccgattttga gtgattaggt gaaccttctg
1621 gatcagagca gtcttcgagt ctgttttgag aagttaagta aatcattatc acttagagga
1681 aggagaagtc gtaacaaggt ttccgtaggt gaacctgcgg
//