LOCUS AB430853 4745 bp DNA linear PLN 26-AUG-2009
DEFINITION Oryza sativa Japonica Group pi21 gene for Pi21 protein, complete
cds, resistant allele.
ACCESSION AB430853
VERSION AB430853.1
KEYWORDS .
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 4745)
AUTHORS Fukuoka,S.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Shuichi Fukuoka
National Institute of Agrobiological Sciences, QTL Genomics
Research Center; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
URL :http://www.nias.affrc.go.jp/
REFERENCE 2
AUTHORS Fukuoka,S., Saka,N., Koga,H., Ono,K., Shimizu,T., Ebana,K.,
Hayashi,N., Takahashi,A., Hirochika,H., Okuno,K. and Yano,M.
TITLE Loss of Function of a Proline-Containing Protein Confers Durable
Disease Resistance in Rice
JOURNAL Science 325, 998-1001 (2009)
COMMENT
FEATURES Location/Qualifiers
source 1..4745
/chromosome="4"
/cultivar="Owarihatamochi"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/note="a XbaI-fragment conatining pi21 gene"
/organism="Oryza sativa Japonica Group"
CDS join(2431..2512,2649..3298)
/codon_start=1
/gene="pi21"
/note="resistant allele"
/product="Pi21 protein"
/protein_id="BAG72123.1"
/transl_table=1
/translation="MGILVILVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRV
IVRGKFDPEKLCKKIWCKAGKIIKEILIVDVWPPPCKPPPCEKPPEDCKPKPCHCCSC
EKPKPKPKPCHCEKPKPCHCEKPKPCEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPE
PPKPPPEPPKEPEPPKPCGCSHAFVCVCKPAPPPPPPCGCSGGHGNCGCGIRPWPPQV
WPPPPVCPPPPWCYTEDNANACSIM"
BASE COUNT 1349 a 1001 c 973 g 1422 t
ORIGIN
1 ctagatgatg ctttatgtga aggcaataaa tgataattaa gtgtaatata atgtattttt
61 taaacatcgt agtgaagtcc catttctagt acgtaatgga tcgaaatggg gagggactgc
121 ttctctttta gaaaaaaaat gtaaaattga gatgagcttt tataagacat gtaaggccat
181 atgtctagtg taagtatgat gctagcaagc acattttagc atcttaaaat aaaaagcaag
241 cacattaata ttttaggagt tagcatggat gcaatacagt agaagaggag atgccaacaa
301 aaaagaatat ggaaaatttg tttcatacca tcaaaagttc ctgtgttttg ctttatacca
361 tcagcgtttg tggtgtactt taacaccatc caaagtttgc tccgttacct atctactcca
421 cgaaatgtgc ttgctagcat ggatgaaaaa gtaaccgaaa caaacagttg tggtatactc
481 ctaagtaatc ctaagtagcc accggattca atactttatt ctcaatcgtc cttctagtct
541 attcccaatt atatgggttt gacccgttac aacgtacgga catgttacta gcgtaaggaa
601 agagatggtt tctgaaagag tttttttttt ccaacagtcc tacccaatct atagcgctag
661 acaagaaagc gaaagctaaa cccatattta ttaccgtaat gttgcaaact taatattacc
721 tgcaatagac atgccctaac atggtttcag gaccacaaac cagagctcta aaattccgag
781 cacatgttca gaatatatat acatttttaa ttcccttcta tactactcca acttacctct
841 atggaggtaa gaggctaaaa ttgaaactag ataactgaat gttcttatat ttttcctaat
901 aaaaatataa ttgctccttt catttaatac ttatatcaca acatgtagcc atatgagcca
961 aaactgtatt agccatattt tagcgaataa ggctcaatgc gattctgtgt ctgagctctg
1021 gcctgaaaat tcttgtaact ttatctcaca tatggtgtgt gaggaagctt ctcatgagta
1081 atatattccc tatttccccg caaaaaaaaa aacttatatc acaacaaaaa tggaaaagac
1141 caacactgag tattgtagaa gctagtactt ttggcaaatg tgcccgaaga tccccaaaac
1201 agtttgtggc ataattcaga agattgttag ctcagaaatc atttcagact aggatattgc
1261 cgacacatca gagttctcgt gtaatcacga agcaaggaac tgtacagtgc agtgatgata
1321 tacaactata ggagaggacg aactgatact gacggatgct gtgtgtaaaa tatctctgta
1381 aaatcaggaa tactgggaga ctgattggat gataggttta tacggtcaca atcatctcgt
1441 taaacacact tttcattaaa gaggaattac caaatacagt aattgattcg acggtgccgc
1501 gagaaatgtg ctatatataa atgctcacct atatttgggc agattagtta atttcaggaa
1561 ttttccacag agaaagctaa atgagtgcta aatgagtcgc attgcgtact actacaaggg
1621 tccaaacaga aattgatatc tgaaattagc ttttcttaag ataacaatga tatttttttt
1681 tattgaagca caaggtgtgc ctgaaatcga attctgaaag gtattcttat ttttcagagg
1741 aaaatgtaca gtggtaccat tctgaaagct aattgagaga tgacaaggcg tgagaaggac
1801 caaactgtcc tatatacatg tggtcatttt ccatctcttg caataggtta tcaagacccc
1861 tcctgaaaca tggaccgtcc agatgcgatc cgacggacga aaaaaaccaa tggcagaata
1921 tttcaggctc tggcatatcc aaacataaat aagtaacata aggttcagct ctgctccatc
1981 catgcatcgc ctccattatt catgcttcga ttctccatgc tttcctctac tgctcattgg
2041 taacattcgg caaatttgac aggtgagctc agtattttaa atcttaatgt agtactttgg
2101 tgtgctaatc tttgctctgt tcaaaagaga attctggttt ctttgctatt ttgaaaagag
2161 aattttcgtt acaggacttc aacttccata atactttttt ttataattaa ggcatgatat
2221 atatcttctt tctgaattcc acgggaattg cactttttcc tgagaaattt gtaaagagca
2281 tgcctgttaa ttgcaagggg cccctaactc tgttatgaga aaagagaact atataagatg
2341 ctcaataagc acctcttttt ttttttctgt taactgacca aagcctgtct atctgcattt
2401 ttttttgttt tttgtttttc ttgtgtgcag atgggtatat tggtcatctt ggtggacctg
2461 caatgctgcc gctgcgatgc caagatcagg aaggtcctgg gctgccttga aggtataata
2521 aattctgccc gaatcgtcca tgtttgattg aattttcaag gctaatcagc agtgttcctg
2581 ctcaattggg agcaaaacct ctgttaaaaa gggtgtgttt gaatgaatat aattgaatat
2641 gaacgcagag gagtactgca tcgagaaggt ggagtacgac gtgaagaaca acagggtgat
2701 cgtgcgcggg aagttcgacc cggagaagct gtgcaagaag atctggtgca aggccggcaa
2761 gatcatcaag gagatcctca tcgtcgacgt ctggccgccg ccgtgcaagc cgccgccgtg
2821 cgagaagcct ccggaggact gcaagcccaa gccctgccat tgctgcagct gcgagaagcc
2881 caagcccaag cccaagccct gccactgcga gaagcccaag ccctgtcact gcgagaagcc
2941 caagccatgc gagaagccgc cgccgaagcc ggagtgcaag ctggtgccgt acccttaccc
3001 ggtgccgtac ccgtacgccg ggcagtggtg ctgcccaaag cctgagccgc cgaagccgcc
3061 gccggagcca ccgaaggagc cggagccgcc gaagccgtgc gggtgctcgc acgccttcgt
3121 gtgcgtctgc aagccggcgc cgccgccgcc gccgccgtgc gggtgctcgg ggggccacgg
3181 gaactgcggc tgcggcatca ggccgtggcc gccgcaggtg tggccgccgc cgcccgtctg
3241 cccgccgccg ccgtggtgct acaccgagga caacgccaac gcctgctcca tcatgtgatg
3301 gccggccggc ggccggcgtc gatcacgatc atctctgctg cttaatttcc ttgcttgcta
3361 ctacctctgc tcctttcctt gcctcggaaa tcggaataaa ttaaacacga ggctgatcga
3421 tgtgtttgta attaatccat ggtgtttgtg ttgtgtgctg tgtgggctgt ataataatta
3481 attacagtat gttcatgtaa atttgtttgt ttgtttgttt atgttgttcg atatgtataa
3541 ttatgtacaa taattaatcg tggagaggct cactaaactc ataaactgta gagtatcttg
3601 gctgtaaaag tgtggcaatt tatctttttc ttgtgttagc attggctaca aatagttttt
3661 ggccgtcttt tctcttcgtt tctccccttc tttatgagat taattgtgtg ctgacctaga
3721 tcaaattata gcgcgctgac ctagttttat tgtaactgct cttatggatg tctgctaaca
3781 ccatcaaaca tgattaccgt ggtatatttg tcttaattac tactaactag gactacctag
3841 gggcaccctt gcatatgttt ttttttcgaa cgaccagata gatttgagtc atttgactag
3901 cgttatatta ataggaggga aaaaaataca aagtacaaat atccaacagg ccgagaaaag
3961 agaaaaaaaa ctgtacatgc ctacgtgcaa acaagattgc acgaagctct cctcactcct
4021 catggcaaca ttctcccaat gtgtttagca tcgaaaatac cccaccaacc tcgtcttgga
4081 tgtgactggt catttggtgt attgtcgcct ccttttccct ctgaagattc ttacgttcca
4141 ttccttccaa atttcctagg cgatgagcaa gaaaagagat ctgagccctt tttgtttagt
4201 tacttccaag tcgcttgttc cttgtgtcca ccaatgcaag aggtttctac tgtcattcca
4261 tttcagaata agccaattga gaactccaaa ccagatttac ttcgaaacca ggcattcgaa
4321 cataaggtgg tcgacagtgt cgagattccg gattagcaga gttatttggt ttgagagtca
4381 cattcctaca accaatagaa aaccatccta tggaccattt agatagtgtc ctagtatttg
4441 cttttatatt tgctataaat attcttcctt tattgttttt ggagttcaca aacttaataa
4501 tcaaactttg tgatttttta atttccatta acgaattcaa ggaaccacct ttatctctca
4561 tcttcattgc acactactga tttctttcat ccttagggac atatggttga tacggagact
4621 gtttttctat cattatctaa aaaaaatcta aggggcatat atatattgtg ttttctctca
4681 ttcatgcatt tcgcactttt ccctattcgt gaaataccat ttcccacatg agtgcaatgt
4741 ttctt
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