LOCUS       VVC12396.1               904 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Fibronectin type-III domain-containing
            protein protein.
ACCESSION   BX284606-4110
PROTEIN_ID  VVC12396.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="T23E7.2"
                     /locus_tag="CELE_T23E7.2"
                     /standard_name="T23E7.2j"
                     /note="Confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00020732"
     intron_pos      40:1 (1/13)
     intron_pos      69:0 (2/13)
     intron_pos      99:0 (3/13)
     intron_pos      255:1 (4/13)
     intron_pos      356:2 (5/13)
     intron_pos      442:2 (6/13)
     intron_pos      595:2 (7/13)
     intron_pos      669:2 (8/13)
     intron_pos      765:0 (9/13)
     intron_pos      789:0 (10/13)
     intron_pos      808:0 (11/13)
     intron_pos      830:2 (12/13)
     intron_pos      868:2 (13/13)
BEGIN
        1 MSEVDAQEEF HDAPEEAVIE IQKDFVAEIE QDNSNAQLVE EGDDQLVTAE ADDEKSAQQV
       61 DEDRTEDQVP DITGTEYVDP MTTSMDGIED LPANDEAQVE ESAPADEPAP EEEKPQEEAP
      121 AEEPAPAEEA PQEEVPAEEP VAEETAPAEE AAVEEPVVEE AAPVEEAPEA EETAPAEEPL
      181 IEVAVEEAPA EEPVAEEAEP EAEKQEFELQ APPEGKRPRT PNDLDNPTAD EEPAAELEAD
      241 AGSEVPPTPK TAASEKQSVP PTPKSAAPSE VPPTPKSAAP SEVPPTPKSA APSEVPLTPK
      301 SAAQSSVPPT PKSAVPSEAP PTPRSAAPSD VPPTPKSNGH IANGSIPGTP SVAQESAKAT
      361 PAATPAATAT PAATATPAAT GTPKADTAFN FEETPATPRS SVPATPTESN LTTPAPKTPK
      421 TPKTPRTPRT PKTPRTPKTP AVVEPEPEPV AEEPEPVAEP EPEPEPVAEA EPEAEPAVEE
      481 EPAEEPEPAA DETATEPTAE EAEPEAVEES IEKTEVVEEE SAPPAARQSS PSPPPARRRP
      541 QSPSPERQRT SRHADRDITS YDEDSYRAVP PPRMPTATSF SSWSPPDKQS YTPISPFVST
      601 ANKYRNEYTS GSSYRPTNMY TSHFDDIVAT GAFSSALYST NRLIERSRSR TRERKQAMRS
      661 QRSASNYYRY SSQAPAPLRA REYSTPPTRE ISRAPSRNTS FVSFLDYSSA KQGELSRANS
      721 RTSIYGDSLS RSCSRANVDA YLGGGRLSRV DSYVRDIHTP YEYEVPSTYD RYRSSSRGPS
      781 YSTINGYTGR IGQLERSLSR EVIQKDRLRT EYQQLSTKLD QACRQMELLS PYTPPNMEDH
      841 RLINRPEIRR SIAYTLDLRA TGLPSTERWR LGNVVYGGLY RKKYDADLEK AVQYYSSCAK
      901 KRRF
//