LOCUS VTW47619.1 616 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Potassium channel domain-containing protein protein. ACCESSION BX284606-2381 PROTEIN_ID VTW47619.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="unc-58" /locus_tag="CELE_T06H11.1" /standard_name="T06H11.1f" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A0A4V0INX3" /db_xref="UniProtKB/TrEMBL:A0A4V0INX3" /db_xref="WormBase:WBGene00006792" intron_pos 6:0 (1/14) intron_pos 73:0 (2/14) intron_pos 101:0 (3/14) intron_pos 138:1 (4/14) intron_pos 188:0 (5/14) intron_pos 231:2 (6/14) intron_pos 317:1 (7/14) intron_pos 374:0 (8/14) intron_pos 414:1 (9/14) intron_pos 427:1 (10/14) intron_pos 449:2 (11/14) intron_pos 490:1 (12/14) intron_pos 520:2 (13/14) intron_pos 582:1 (14/14) BEGIN 1 MVFPQVTKDL QKEGHPRRLQ SSAGQHQALI MQPLVVQHYA QNVHTEVQLG LAPPLSGGGS 61 TGGGSGGGFF GSGLFRTRPQ SNRPRAYSML PLTSSISQEE KANILASNTK KHSNRSHKRY 121 YPLSQEDTLE LLLLLNQDHV TARWEGANIN SQSALLDADD GATVITDTIK DDQDDKEPKS 181 CPQQTVKYIK ILTPHVILVS VLIGYLCLGA WILMLLETRT ELLARSKKLV RLTNLMSNFT 241 AESWKMLNNA QHGVSNMDEG EWAATFREWM VRVSETVDDR RPIRRELNRP DDLSNMHNKW 301 TFPTAILYVL TVLTTCGYGE VSVDTDVGKV FSVAFALVGI PLMFITAADI GKFLSETLLQ 361 FVSFWNRSVR KVKQWMSRIR HGRRKSLQST GGPNDTLDIL GVDGTEEKLW FPIVPNGERT 421 KLWFPIGAYV SCICIYCSIG SAMFITWERT WSFIHAFHFG FNLIVTVGLG DIVVTDYIFL 481 SLIVAFVIVG LSVVTMCVDL ASTHLKAYFT RIHYFGRAKR FLGMSEELKE IVALLGAMRR 541 KKGGKVTWND VRDFLDNELR DRPFEPHELL MKLRFIDETS SGMSTIRHNS FQSDFFRESE 601 YIRRVAALRP EQPAYL //