LOCUS VTW47551.1 751 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Protein kinase C protein. ACCESSION BX284606-2174 PROTEIN_ID VTW47551.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="pkc-2" /locus_tag="CELE_E01H11.1" /standard_name="E01H11.1e" /note="Confirmed by transcript evidence" /db_xref="GOA:A0A4V6M3D7" /db_xref="UniProtKB/TrEMBL:A0A4V6M3D7" /db_xref="WormBase:WBGene00004033" intron_pos 29:2 (1/13) intron_pos 85:1 (2/13) intron_pos 108:2 (3/13) intron_pos 142:1 (4/13) intron_pos 170:0 (5/13) intron_pos 250:1 (6/13) intron_pos 303:2 (7/13) intron_pos 384:0 (8/13) intron_pos 491:0 (9/13) intron_pos 559:0 (10/13) intron_pos 629:1 (11/13) intron_pos 676:0 (12/13) intron_pos 702:0 (13/13) BEGIN 1 MSLRPKQKSS STSVFLKSHK FSLTSHILRK AKKRETMDSA ERRRSETDIG GGPRNSADAR 61 PSLDLSSDPM LESNLALRKL SEAFAQRIEG KAFVRRGALR QKNVHEIKSH KFIARFFKQP 121 TFCSHCKDFL WGITKQGFQC QVCTLVVHKR CHEFVNFACP GADKGVDTDD PRQQHKWKVQ 181 TYSSPTFCDH CGSLLYGILH QGMKCQSCDT NVHHRCVKNV PNMCGTDNTE KRGRLRIEAH 241 IENDQLTIKI LEAKNLIPMD PNGLSDPYVK CKLIPEDSGC KSKQKTKTLR ATLNPQWNET 301 FTYKLLPGDK DRRLSIEVWD WDRTSRNDFM GSLSFGISEL MKEAASGWYK LLSAEEGEFY 361 NINITPEYDE DMEKVRKKMN ENFITRDNSS SKPKDPAAPR ASTLPLGSSN HNVIKASDFN 421 FLTVLGKGSF GKVLLGEQKT TKELFAIKVL KKDVIIQDDD VECTMTEKRV LALPEKPSFL 481 VALHSCFQTM DRLYFVMEFV NGGDLMYQIQ QVGKFKEPVA VFYAAEIAVG LFFLHSKGII 541 YRDLKLDNVM LERDGHIKIT DFGMCKENIF GDATTKTFCG TPDYIAPEII LYQPYGKSVD 601 WWAYGVLLFE MLAGQPPFDG EDEDELFTAI TEHNVSYPKS LSKEAVSLCK ALLIKNPSKR 661 LGCTGDDESA SRDIKEHPFF RRIDWFKIET RQIQPPFKPK LKSADDTSNF DSEFTHEVPK 721 LTPIDRLFLM NLDQTEFEGF SFVNPEYVQE C //