LOCUS VTW47494.1 562 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans t-SNARE coiled-coil homology domain- containing protein protein. ACCESSION BX284606-2087 PROTEIN_ID VTW47494.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C24A3.1" /locus_tag="CELE_C24A3.1" /standard_name="C24A3.1a" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A0A4V0ILC7" /db_xref="WormBase:WBGene00016032" intron_pos 20:2 (1/15) intron_pos 39:0 (2/15) intron_pos 82:0 (3/15) intron_pos 120:0 (4/15) intron_pos 163:2 (5/15) intron_pos 239:0 (6/15) intron_pos 278:0 (7/15) intron_pos 319:2 (8/15) intron_pos 368:0 (9/15) intron_pos 400:1 (10/15) intron_pos 423:2 (11/15) intron_pos 457:0 (12/15) intron_pos 482:2 (13/15) intron_pos 514:0 (14/15) intron_pos 550:0 (15/15) BEGIN 1 MSRRPRGTRD TAKDIILGLA PSGQGPKAPK EGHAVTPKAA RKRLEQNQDA LQRRLQNNES 61 SGVQSRDFDD IRRQMNGVDA KLMIMNNDIS GLRNSMDRQV TDLMHINNEM KSRPVVDPSK 121 ISNATSQLDS KLRDMHNQVM DLTKNLSKEQ RDREKDSKTA GDGIQRLQDM IRQQDLARQD 181 IMNNLSKKGD VDKEKLNEET RRLNDKINLI TSEVTKKMTE NQQKAKDDFN SRISVLESMI 241 RAQSERIVAN ENEMRHSFEA KLAELSGQLE LAMKQITSEK AKQKERFQKV NEALAALEHH 301 LELGNSKIDK LMNSEIQARK LHEKGLLAKM TDIEDRVNNY VGGMNKSIDE MKNGKNNVHM 361 PALDTDALRR EMEAIAADKN KLSMEGLLKL EEKMSRVQQG FYHDRKEMTQ RMTDLGDGEH 421 VNKIRAQLNK MDALQEDMEK AQDRIRDKVE RQIPQDLNEL SAKADNIKHQ LNTRIDNEEE 481 ERYLAIKELQ EAFTTLQQSQ HTGGKTAASS DQQMKRDVDE CKIAIKKLAE SVTTVKNVLD 541 KKITDETKRR EDDVSSIRRQ MS //