LOCUS VTW47461.1 3554 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Phosphoinositide phospholipase C protein.
ACCESSION BX284606-2563
PROTEIN_ID VTW47461.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="plc-1"
/locus_tag="CELE_F31B12.1"
/standard_name="F31B12.1k"
/note="Partially confirmed by transcript evidence"
/db_xref="GOA:A0A4V6M3C0"
/db_xref="UniProtKB/TrEMBL:A0A4V6M3C0"
/db_xref="WormBase:WBGene00004036"
intron_pos 13:0 (1/64)
intron_pos 29:2 (2/64)
intron_pos 64:1 (3/64)
intron_pos 103:2 (4/64)
intron_pos 121:0 (5/64)
intron_pos 150:1 (6/64)
intron_pos 184:2 (7/64)
intron_pos 241:2 (8/64)
intron_pos 292:1 (9/64)
intron_pos 323:2 (10/64)
intron_pos 384:1 (11/64)
intron_pos 441:1 (12/64)
intron_pos 471:0 (13/64)
intron_pos 506:0 (14/64)
intron_pos 559:0 (15/64)
intron_pos 597:1 (16/64)
intron_pos 622:2 (17/64)
intron_pos 653:1 (18/64)
intron_pos 703:2 (19/64)
intron_pos 811:1 (20/64)
intron_pos 862:0 (21/64)
intron_pos 981:2 (22/64)
intron_pos 1045:2 (23/64)
intron_pos 1094:1 (24/64)
intron_pos 1164:2 (25/64)
intron_pos 1247:1 (26/64)
intron_pos 1361:2 (27/64)
intron_pos 1424:0 (28/64)
intron_pos 1473:1 (29/64)
intron_pos 1541:0 (30/64)
intron_pos 1562:0 (31/64)
intron_pos 1586:0 (32/64)
intron_pos 1612:0 (33/64)
intron_pos 1669:1 (34/64)
intron_pos 1712:1 (35/64)
intron_pos 1806:0 (36/64)
intron_pos 1876:0 (37/64)
intron_pos 1973:1 (38/64)
intron_pos 2015:1 (39/64)
intron_pos 2094:0 (40/64)
intron_pos 2155:0 (41/64)
intron_pos 2205:0 (42/64)
intron_pos 2251:1 (43/64)
intron_pos 2277:2 (44/64)
intron_pos 2366:1 (45/64)
intron_pos 2437:2 (46/64)
intron_pos 2484:1 (47/64)
intron_pos 2515:2 (48/64)
intron_pos 2556:0 (49/64)
intron_pos 2632:0 (50/64)
intron_pos 2669:0 (51/64)
intron_pos 2748:1 (52/64)
intron_pos 2783:2 (53/64)
intron_pos 2859:0 (54/64)
intron_pos 2910:0 (55/64)
intron_pos 3010:0 (56/64)
intron_pos 3101:0 (57/64)
intron_pos 3211:2 (58/64)
intron_pos 3244:0 (59/64)
intron_pos 3323:0 (60/64)
intron_pos 3352:0 (61/64)
intron_pos 3412:1 (62/64)
intron_pos 3455:0 (63/64)
intron_pos 3486:1 (64/64)
BEGIN
1 MSLRQASHKF PSVDSMPTSR DSSMETTDRY PFGYTTELAR TEPSASTAKR LRQRLQRQQS
61 GQSGLSGRRY TGESSECSSL VGTPTDTGRS FTFGAAQRVM RERDDRKPSV TQNLSEIMLE
121 AIHYEDVNLV ERLLTAHSSK QPMSTSPSIG STNTLTDLAQ RRHGAGAHRR SNASSTVSTH
181 SGGRSTCAMM NTLHMAVAHK QRDIVELLLK NGYDPNTPAS CHCKGNCTAT GNIPLTSIIP
241 RTHSMTPELC STCSQLRVVS IVDQTPLGVA VRSQSSELIA LLIAYGGDVN LGDEDGNTPL
301 MLAVRESPLS WPCLHTLIFF GAQIEQKNMR GICPLDLAPE LKKLQQTCVE ELFKNACSGD
361 CEPPSRSTPG PSAKNWNRLQ VDNVSQGERS LSKAPLSPKP SAAASVSTCS MLETSSAKEC
421 ARRKSLVSLQ LHRKSRNVKE YPVIDCVSWE QAWELLKKMA CNPECLDNIV NSLSKFATQM
481 ENTPSSVDRD QFDAHMGGLL HKMIHTAIEE YESSTPTYKK QKKLHLTWLL SQIATFCFTF
541 LQKSGTSRQF SALNTLNKII DAGLVHDLFA FNDVVFHSSR ILNRCHAFDS DEPPTPSGES
601 FNSNADQNST VDHVFIYGAG YKDQSLLPSP TVAPTRHKSD LMNSFSEMDP SQVIVALHNA
661 ITMQNREVGS RSVCSPAHRW RQCCAHCTQI LVARLLLFLT HAKKFRSRLS ERHQLRSLVA
721 LLEPTLEPQL LCLLLQVLAL IALDPSTHTT LIDIQIDDVL IQMLLPADDW YYTNHSTKYG
781 TFVKYHAARV LVYVGMGDRV GSRVNLFNMM TFEPSAKSGS QQNEDDYICE TCATPRSRST
841 FSRSAVSVEG VLLKVLAEVA ELVRQSQHLS ASEPITEESP SAGSPPAVLP NQAEQKSINE
901 KNAEKLTQLG CQILISLEQL EAHLCKLGLV LDSVLLLRLL LHKLSWDLGL VTKKRVAVVD
961 HVYKPITDPR AHSSCSLGNN RNFGKSKSFD RREDSKRDKN YLRVDQGSRA SKRVHIRRSS
1021 SVEIIRPKRL SSGAKDIKNR ERRKRLGTDT SSGSNRSKKT NSSSSSVQKH LPKYIQSLFR
1081 SRMGTDPCKR TSRRDSNESN TSGSDAVLEF TRKLQNYPLT RREAQRLTYR SNGQQDSNDS
1141 KMGPRTLGYV YLPELEIQGA SPPRSPGPLT GNSLEEGTTM LLDTRRPSSP QAIPGLPLIE
1201 IRRPSALSQF EFGYFVNSPE LSGSEVSDCA PLLLSGQIGG SRKSSDETSL GGWSSRASSV
1261 MSQRSSRSSV GLRLSTFSGG TSIASDNSGP FLFSFVLRKR ASTIGTRIPI PRRALSRSSG
1321 DSLRVPDRES PLHLASMTEM NPDFQCVRQL ILNLLNVYTK RNDNVVSTMK ECADVLRQIL
1381 NSPQHPTVKN WCAEIIHVVS THVEEEEPTT AENNEQINDE YLEFQDQVIS GSLPCPKEEA
1441 AYLASIQLSV EEQWPSNKRT QTIRRHLLKG QFGRIRDLAQ KIMVTPWEVD QNLYCTPPRF
1501 PNESANASRA QSVVEEIQHR SRTPTLLRCI TNTDGLMSEE MQAQCLPVDL RGDRRTIKLV
1561 KERKRKLFHS QVYESEIGMK KLYIQTAKKL AAFGCKVFQV KELLHGRTLR KTLRLLCLSS
1621 AQLCLLDGST KLVLKRQHAS TLQQWRVGGG VSKHQLLLEF RGTKWQLIAP SYNALKSISM
1681 TLWEIMQNSA SNSIQRSLNQ SMHRSHTEAT VSTSRSDSTS STQSATAGFI LNEEPITLFR
1741 LELERLQYIL HFPEEVAFQL SSTEYQLFYS IQPMDYVRYV SCDLTSVPVS ENPSPVRNLV
1801 KRLSEVSSWI THVIVSQPTH DDRKVALTAI LRIVETCWNI GNFNAAVEVL MGLKSEKLRP
1861 FWLSLRQEEK SQFDSLCETL LPANQALPSQ AYINAVQRAL RMPQSRVIPF FGIFLRDLYA
1921 IVNDLPNIVV IGQEGETQKL EFMSDPNGED HFSSRIGVGG LLNADKINLV AIVLDNLELF
1981 HRHSRTMIKL LEEQAVPPIQ IPQNEREQKE KEAKTYEPVQ VVRGSSHGVA LIPLDTLTFD
2041 LDVIQRLQHG TTVIHYEPDS GRSNLCLLRL DPSCGQINWH KISYSVNKDP KEKDVLAKVS
2101 VSNLQPLDSG RGAPSPMPSG RTPGTGGVGV EEGELKLSVV KGVELVDSYD IDIEAIYRRH
2161 SMEEMSVPVS CWKVSHGQLL SDNEFIYFLA PQQIAQFWTN GLQSVVKSLQ GQQRYPDRRM
2221 LWIKNVYLSL YEITGESNCG PRPFEALQAF GLSQTNTNAT RPNDSSLSSE PGGAKSRLKN
2281 LKNAMQKKLR GASREGSRSQ SPQPHSPLVR PPSIKSQISS QSGPPGPNSP GYLLKPRGEP
2341 ANSDAGDIDS IYTPRSRTPT SSSYGGRSVG GRSCKSWRSR GGETPNSGSI SSSGQMSIQV
2401 SGLSGPSGKE FQEKPLTLVE FAELFRLFNT RMRKDLRDVF NDVLSTATTP QHCPKRERDR
2461 HSPRMQSRLA SVSNSYNADF LSNDFLTRNT AVTSHHISEK QNKIYNALAL ASVNSMGGLM
2521 DTSRSSMLTP QMLRAFVNTH QMEQIDEQTA IKLIQDHEPD GICRQKNQMS FEGFTRFLCD
2581 PVNFAFVPET IEPDEEDLRY PLSHYYINSS HNTYLTGHQL KGPSSSEMYR QVLLTGCRCV
2641 ELDCWDGDDG LPLIYHGHTL VSKIGFRQVV EIIKKSAFIT SDLPVILSIE NHCSLQQQAK
2701 MAQMFKTVLG DLLVSNFLFE ADFSDSPRLP CPLQMKNKIL IKNKKMIVDP PTPLPMIERG
2761 AVQRGETQLN LHRKQSKNSY ESSTVDEVED DDLDEFLDDE ENEEDDQEEV QVRSEKEDSP
2821 KTSKRAEKSA RNIKQQDSLC SDHSVEQAKP STSKTTSKTN DRKTEDEVLY AQLAQNAIRN
2881 QQPRKNNTGV QIAPELSDIV IYMQATKFKG FPPVDGIQSP RIMEEGPASA SLSFSSRART
2941 PSNLLNTPAP PRRQRSSTQL SQELAAEFLG SVRANATATC YQVTSLNENA AKKLMKRHPA
3001 KCVSYTRDHL IRTYPSAKHY DSSNFNPINC WAHGMQMVAL NFQTPDVIMA VNQAMFEQSG
3061 NCGYQLKPRC LWDESHLLYN KFLPLSKDIA GHSALLLNLT IISGQHVYPN THYASLYVEI
3121 EVIGIHNDCV REKSKVVQRN SVNPIWNHTT QLRIACVDLA FLRIAVCDSG QNGRVVAHRV
3181 VPVKCIRPGF RHLPLRTPTN LPIDNAMIFL RTRFEQEEHI YLHDDDSNTY CNLEHTLAYR
3241 TDLTPNLSPT PILKKQIFVL RITGAFADET AITVHSESGS TVKTVMQQAL LNAGKNADQV
3301 EEYVLIEESL PAPSGEDPIE QRVLPLNEPI MDAVACWNGS MRRFVLRKKG SDPSSRAWIT
3361 SIIKSGTSGS STSVSPSPLT KDGHVKSASS NQLHGRSLDT DAFGEHLEVT EGLNPRARSM
3421 GDTFLVCVHN VSEDQPYAIL RAGIHSTAAD IIRQVFVKAR RSNVDDSEFV LVEETCDDPK
3481 LNQGQMTPKY PNNRTTSRVL GQNENVWKAQ SRWKSMGRFV LENRKDTVHA TLEKVRSFIS
3541 KLEAAKASMD PRHE
//