LOCUS VTW47460.1 3487 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Phosphoinositide phospholipase C protein.
ACCESSION BX284606-2562
PROTEIN_ID VTW47460.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="plc-1"
/locus_tag="CELE_F31B12.1"
/standard_name="F31B12.1j"
/note="Partially confirmed by transcript evidence"
/db_xref="GOA:A0A4V0IMY5"
/db_xref="UniProtKB/TrEMBL:A0A4V0IMY5"
/db_xref="WormBase:WBGene00004036"
intron_pos 13:0 (1/63)
intron_pos 29:2 (2/63)
intron_pos 64:1 (3/63)
intron_pos 103:2 (4/63)
intron_pos 121:0 (5/63)
intron_pos 150:1 (6/63)
intron_pos 184:2 (7/63)
intron_pos 241:2 (8/63)
intron_pos 292:1 (9/63)
intron_pos 323:2 (10/63)
intron_pos 384:1 (11/63)
intron_pos 414:0 (12/63)
intron_pos 449:0 (13/63)
intron_pos 502:0 (14/63)
intron_pos 540:1 (15/63)
intron_pos 565:2 (16/63)
intron_pos 596:1 (17/63)
intron_pos 646:2 (18/63)
intron_pos 754:1 (19/63)
intron_pos 805:0 (20/63)
intron_pos 924:2 (21/63)
intron_pos 978:2 (22/63)
intron_pos 1027:1 (23/63)
intron_pos 1097:2 (24/63)
intron_pos 1180:1 (25/63)
intron_pos 1294:2 (26/63)
intron_pos 1357:0 (27/63)
intron_pos 1406:1 (28/63)
intron_pos 1474:0 (29/63)
intron_pos 1495:0 (30/63)
intron_pos 1519:0 (31/63)
intron_pos 1545:0 (32/63)
intron_pos 1602:1 (33/63)
intron_pos 1645:1 (34/63)
intron_pos 1739:0 (35/63)
intron_pos 1809:0 (36/63)
intron_pos 1906:1 (37/63)
intron_pos 1948:1 (38/63)
intron_pos 2027:0 (39/63)
intron_pos 2088:0 (40/63)
intron_pos 2138:0 (41/63)
intron_pos 2184:1 (42/63)
intron_pos 2210:2 (43/63)
intron_pos 2299:1 (44/63)
intron_pos 2370:2 (45/63)
intron_pos 2417:1 (46/63)
intron_pos 2448:2 (47/63)
intron_pos 2489:0 (48/63)
intron_pos 2565:0 (49/63)
intron_pos 2602:0 (50/63)
intron_pos 2681:1 (51/63)
intron_pos 2716:2 (52/63)
intron_pos 2792:0 (53/63)
intron_pos 2843:0 (54/63)
intron_pos 2943:0 (55/63)
intron_pos 3034:0 (56/63)
intron_pos 3144:2 (57/63)
intron_pos 3177:0 (58/63)
intron_pos 3256:0 (59/63)
intron_pos 3285:0 (60/63)
intron_pos 3345:1 (61/63)
intron_pos 3388:0 (62/63)
intron_pos 3419:1 (63/63)
BEGIN
1 MSLRQASHKF PSVDSMPTSR DSSMETTDRY PFGYTTELAR TEPSASTAKR LRQRLQRQQS
61 GQSGLSGRRY TGESSECSSL VGTPTDTGRS FTFGAAQRVM RERDDRKPSV TQNLSEIMLE
121 AIHYEDVNLV ERLLTAHSSK QPMSTSPSIG STNTLTDLAQ RRHGAGAHRR SNASSTVSTH
181 SGGRSTCAMM NTLHMAVAHK QRDIVELLLK NGYDPNTPAS CHCKGNCTAT GNIPLTSIIP
241 RTHSMTPELC STCSQLRVVS IVDQTPLGVA VRSQSSELIA LLIAYGGDVN LGDEDGNTPL
301 MLAVRESPLS WPCLHTLIFF GAQIEQKNMR GICPLDLAPE LKKLQQTCVE ELFKNACSGD
361 CEPPSRSTPG PSAKNWNRLQ VDNDPVIDCV SWEQAWELLK KMACNPECLD NIVNSLSKFA
421 TQMENTPSSV DRDQFDAHMG GLLHKMIHTA IEEYESSTPT YKKQKKLHLT WLLSQIATFC
481 FTFLQKSGTS RQFSALNTLN KIIDAGLVHD LFAFNDVVFH SSRILNRCHA FDSDEPPTPS
541 GESFNSNADQ NSTVDHVFIY GAGYKDQSLL PSPTVAPTRH KSDLMNSFSE MDPSQVIVAL
601 HNAITMQNRE VGSRSVCSPA HRWRQCCAHC TQILVARLLL FLTHAKKFRS RLSERHQLRS
661 LVALLEPTLE PQLLCLLLQV LALIALDPST HTTLIDIQID DVLIQMLLPA DDWYYTNHST
721 KYGTFVKYHA ARVLVYVGMG DRVGSRVNLF NMMTFEPSAK SGSQQNEDDY ICETCATPRS
781 RSTFSRSAVS VEGVLLKVLA EVAELVRQSQ HLSASEPITE ESPSAGSPPA VLPNQAEQKS
841 INEKNAEKLT QLGCQILISL EQLEAHLCKL GLVLDSVLLL RLLLHKLSWD LGLVTKKRVA
901 VVDHVYKPIT DPRAHSSCSL GNNRREDSKR DKNYLRVDQG SRASKRVHIR RSSSVEIIRP
961 KRLSSGAKDI KNRERRKRLG TDTSSGSNRS KKTNSSSSSV QKHLPKYIQS LFRSRMGTDP
1021 CKRTSRRDSN ESNTSGSDAV LEFTRKLQNY PLTRREAQRL TYRSNGQQDS NDSKMGPRTL
1081 GYVYLPELEI QGASPPRSPG PLTGNSLEEG TTMLLDTRRP SSPQAIPGLP LIEIRRPSAL
1141 SQFEFGYFVN SPELSGSEVS DCAPLLLSGQ IGGSRKSSDE TSLGGWSSRA SSVMSQRSSR
1201 SSVGLRLSTF SGGTSIASDN SGPFLFSFVL RKRASTIGTR IPIPRRALSR SSGDSLRVPD
1261 RESPLHLASM TEMNPDFQCV RQLILNLLNV YTKRNDNVVS TMKECADVLR QILNSPQHPT
1321 VKNWCAEIIH VVSTHVEEEE PTTAENNEQI NDEYLEFQDQ VISGSLPCPK EEAAYLASIQ
1381 LSVEEQWPSN KRTQTIRRHL LKGQFGRIRD LAQKIMVTPW EVDQNLYCTP PRFPNESANA
1441 SRAQSVVEEI QHRSRTPTLL RCITNTDGLM SEEMQAQCLP VDLRGDRRTI KLVKERKRKL
1501 FHSQVYESEI GMKKLYIQTA KKLAAFGCKV FQVKELLHGR TLRKTLRLLC LSSAQLCLLD
1561 GSTKLVLKRQ HASTLQQWRV GGGVSKHQLL LEFRGTKWQL IAPSYNALKS ISMTLWEIMQ
1621 NSASNSIQRS LNQSMHRSHT EATVSTSRSD STSSTQSATA GFILNEEPIT LFRLELERLQ
1681 YILHFPEEVA FQLSSTEYQL FYSIQPMDYV RYVSCDLTSV PVSENPSPVR NLVKRLSEVS
1741 SWITHVIVSQ PTHDDRKVAL TAILRIVETC WNIGNFNAAV EVLMGLKSEK LRPFWLSLRQ
1801 EEKSQFDSLC ETLLPANQAL PSQAYINAVQ RALRMPQSRV IPFFGIFLRD LYAIVNDLPN
1861 IVVIGQEGET QKLEFMSDPN GEDHFSSRIG VGGLLNADKI NLVAIVLDNL ELFHRHSRTM
1921 IKLLEEQAVP PIQIPQNERE QKEKEAKTYE PVQVVRGSSH GVALIPLDTL TFDLDVIQRL
1981 QHGTTVIHYE PDSGRSNLCL LRLDPSCGQI NWHKISYSVN KDPKEKDVLA KVSVSNLQPL
2041 DSGRGAPSPM PSGRTPGTGG VGVEEGELKL SVVKGVELVD SYDIDIEAIY RRHSMEEMSV
2101 PVSCWKVSHG QLLSDNEFIY FLAPQQIAQF WTNGLQSVVK SLQGQQRYPD RRMLWIKNVY
2161 LSLYEITGES NCGPRPFEAL QAFGLSQTNT NATRPNDSSL SSEPGGAKSR LKNLKNAMQK
2221 KLRGASREGS RSQSPQPHSP LVRPPSIKSQ ISSQSGPPGP NSPGYLLKPR GEPANSDAGD
2281 IDSIYTPRSR TPTSSSYGGR SVGGRSCKSW RSRGGETPNS GSISSSGQMS IQVSGLSGPS
2341 GKEFQEKPLT LVEFAELFRL FNTRMRKDLR DVFNDVLSTA TTPQHCPKRE RDRHSPRMQS
2401 RLASVSNSYN ADFLSNDFLT RNTAVTSHHI SEKQNKIYNA LALASVNSMG GLMDTSRSSM
2461 LTPQMLRAFV NTHQMEQIDE QTAIKLIQDH EPDGICRQKN QMSFEGFTRF LCDPVNFAFV
2521 PETIEPDEED LRYPLSHYYI NSSHNTYLTG HQLKGPSSSE MYRQVLLTGC RCVELDCWDG
2581 DDGLPLIYHG HTLVSKIGFR QVVEIIKKSA FITSDLPVIL SIENHCSLQQ QAKMAQMFKT
2641 VLGDLLVSNF LFEADFSDSP RLPCPLQMKN KILIKNKKMI VDPPTPLPMI ERGAVQRGET
2701 QLNLHRKQSK NSYESSTVDE VEDDDLDEFL DDEENEEDDQ EEVQVRSEKE DSPKTSKRAE
2761 KSARNIKQQD SLCSDHSVEQ AKPSTSKTTS KTNDRKTEDE VLYAQLAQNA IRNQQPRKNN
2821 TGVQIAPELS DIVIYMQATK FKGFPPVDGI QSPRIMEEGP ASASLSFSSR ARTPSNLLNT
2881 PAPPRRQRSS TQLSQELAAE FLGSVRANAT ATCYQVTSLN ENAAKKLMKR HPAKCVSYTR
2941 DHLIRTYPSA KHYDSSNFNP INCWAHGMQM VALNFQTPDV IMAVNQAMFE QSGNCGYQLK
3001 PRCLWDESHL LYNKFLPLSK DIAGHSALLL NLTIISGQHV YPNTHYASLY VEIEVIGIHN
3061 DCVREKSKVV QRNSVNPIWN HTTQLRIACV DLAFLRIAVC DSGQNGRVVA HRVVPVKCIR
3121 PGFRHLPLRT PTNLPIDNAM IFLRTRFEQE EHIYLHDDDS NTYCNLEHTL AYRTDLTPNL
3181 SPTPILKKQI FVLRITGAFA DETAITVHSE SGSTVKTVMQ QALLNAGKNA DQVEEYVLIE
3241 ESLPAPSGED PIEQRVLPLN EPIMDAVACW NGSMRRFVLR KKGSDPSSRA WITSIIKSGT
3301 SGSSTSVSPS PLTKDGHVKS ASSNQLHGRS LDTDAFGEHL EVTEGLNPRA RSMGDTFLVC
3361 VHNVSEDQPY AILRAGIHST AADIIRQVFV KARRSNVDDS EFVLVEETCD DPKLNQGQMT
3421 PKYPNNRTTS RVLGQNENVW KAQSRWKSMG RFVLENRKDT VHATLEKVRS FISKLEAAKA
3481 SMDPRHE
//