LOCUS VTW47457.1 3494 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Phosphoinositide phospholipase C protein.
ACCESSION BX284606-2559
PROTEIN_ID VTW47457.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="plc-1"
/locus_tag="CELE_F31B12.1"
/standard_name="F31B12.1g"
/note="Partially confirmed by transcript evidence"
/db_xref="GOA:A0A4V0IJW2"
/db_xref="UniProtKB/TrEMBL:A0A4V0IJW2"
/db_xref="WormBase:WBGene00004036"
intron_pos 13:0 (1/63)
intron_pos 29:2 (2/63)
intron_pos 64:1 (3/63)
intron_pos 103:2 (4/63)
intron_pos 121:0 (5/63)
intron_pos 150:1 (6/63)
intron_pos 184:2 (7/63)
intron_pos 241:2 (8/63)
intron_pos 292:1 (9/63)
intron_pos 323:2 (10/63)
intron_pos 384:1 (11/63)
intron_pos 414:0 (12/63)
intron_pos 449:0 (13/63)
intron_pos 502:0 (14/63)
intron_pos 540:1 (15/63)
intron_pos 565:2 (16/63)
intron_pos 596:1 (17/63)
intron_pos 646:2 (18/63)
intron_pos 754:1 (19/63)
intron_pos 805:0 (20/63)
intron_pos 924:2 (21/63)
intron_pos 978:2 (22/63)
intron_pos 1034:1 (23/63)
intron_pos 1104:2 (24/63)
intron_pos 1187:1 (25/63)
intron_pos 1301:2 (26/63)
intron_pos 1364:0 (27/63)
intron_pos 1413:1 (28/63)
intron_pos 1481:0 (29/63)
intron_pos 1502:0 (30/63)
intron_pos 1526:0 (31/63)
intron_pos 1552:0 (32/63)
intron_pos 1609:1 (33/63)
intron_pos 1652:1 (34/63)
intron_pos 1746:0 (35/63)
intron_pos 1816:0 (36/63)
intron_pos 1913:1 (37/63)
intron_pos 1955:1 (38/63)
intron_pos 2034:0 (39/63)
intron_pos 2095:0 (40/63)
intron_pos 2145:0 (41/63)
intron_pos 2191:1 (42/63)
intron_pos 2217:2 (43/63)
intron_pos 2306:1 (44/63)
intron_pos 2377:2 (45/63)
intron_pos 2424:1 (46/63)
intron_pos 2455:2 (47/63)
intron_pos 2496:0 (48/63)
intron_pos 2572:0 (49/63)
intron_pos 2609:0 (50/63)
intron_pos 2688:1 (51/63)
intron_pos 2723:2 (52/63)
intron_pos 2799:0 (53/63)
intron_pos 2850:0 (54/63)
intron_pos 2950:0 (55/63)
intron_pos 3041:0 (56/63)
intron_pos 3151:2 (57/63)
intron_pos 3184:0 (58/63)
intron_pos 3263:0 (59/63)
intron_pos 3292:0 (60/63)
intron_pos 3352:1 (61/63)
intron_pos 3395:0 (62/63)
intron_pos 3426:1 (63/63)
BEGIN
1 MSLRQASHKF PSVDSMPTSR DSSMETTDRY PFGYTTELAR TEPSASTAKR LRQRLQRQQS
61 GQSGLSGRRY TGESSECSSL VGTPTDTGRS FTFGAAQRVM RERDDRKPSV TQNLSEIMLE
121 AIHYEDVNLV ERLLTAHSSK QPMSTSPSIG STNTLTDLAQ RRHGAGAHRR SNASSTVSTH
181 SGGRSTCAMM NTLHMAVAHK QRDIVELLLK NGYDPNTPAS CHCKGNCTAT GNIPLTSIIP
241 RTHSMTPELC STCSQLRVVS IVDQTPLGVA VRSQSSELIA LLIAYGGDVN LGDEDGNTPL
301 MLAVRESPLS WPCLHTLIFF GAQIEQKNMR GICPLDLAPE LKKLQQTCVE ELFKNACSGD
361 CEPPSRSTPG PSAKNWNRLQ VDNDPVIDCV SWEQAWELLK KMACNPECLD NIVNSLSKFA
421 TQMENTPSSV DRDQFDAHMG GLLHKMIHTA IEEYESSTPT YKKQKKLHLT WLLSQIATFC
481 FTFLQKSGTS RQFSALNTLN KIIDAGLVHD LFAFNDVVFH SSRILNRCHA FDSDEPPTPS
541 GESFNSNADQ NSTVDHVFIY GAGYKDQSLL PSPTVAPTRH KSDLMNSFSE MDPSQVIVAL
601 HNAITMQNRE VGSRSVCSPA HRWRQCCAHC TQILVARLLL FLTHAKKFRS RLSERHQLRS
661 LVALLEPTLE PQLLCLLLQV LALIALDPST HTTLIDIQID DVLIQMLLPA DDWYYTNHST
721 KYGTFVKYHA ARVLVYVGMG DRVGSRVNLF NMMTFEPSAK SGSQQNEDDY ICETCATPRS
781 RSTFSRSAVS VEGVLLKVLA EVAELVRQSQ HLSASEPITE ESPSAGSPPA VLPNQAEQKS
841 INEKNAEKLT QLGCQILISL EQLEAHLCKL GLVLDSVLLL RLLLHKLSWD LGLVTKKRVA
901 VVDHVYKPIT DPRAHSSCSL GNNRREDSKR DKNYLRVDQG SRASKRVHIR RSSSVEIIRP
961 KRLSSGAKDI KNRERRKRLG TDTSSGSNRS KKTNSSSSSV QKHLPKYIQS LFRSRMGTDP
1021 CKRTSRSEST LPHRDSNESN TSGSDAVLEF TRKLQNYPLT RREAQRLTYR SNGQQDSNDS
1081 KMGPRTLGYV YLPELEIQGA SPPRSPGPLT GNSLEEGTTM LLDTRRPSSP QAIPGLPLIE
1141 IRRPSALSQF EFGYFVNSPE LSGSEVSDCA PLLLSGQIGG SRKSSDETSL GGWSSRASSV
1201 MSQRSSRSSV GLRLSTFSGG TSIASDNSGP FLFSFVLRKR ASTIGTRIPI PRRALSRSSG
1261 DSLRVPDRES PLHLASMTEM NPDFQCVRQL ILNLLNVYTK RNDNVVSTMK ECADVLRQIL
1321 NSPQHPTVKN WCAEIIHVVS THVEEEEPTT AENNEQINDE YLEFQDQVIS GSLPCPKEEA
1381 AYLASIQLSV EEQWPSNKRT QTIRRHLLKG QFGRIRDLAQ KIMVTPWEVD QNLYCTPPRF
1441 PNESANASRA QSVVEEIQHR SRTPTLLRCI TNTDGLMSEE MQAQCLPVDL RGDRRTIKLV
1501 KERKRKLFHS QVYESEIGMK KLYIQTAKKL AAFGCKVFQV KELLHGRTLR KTLRLLCLSS
1561 AQLCLLDGST KLVLKRQHAS TLQQWRVGGG VSKHQLLLEF RGTKWQLIAP SYNALKSISM
1621 TLWEIMQNSA SNSIQRSLNQ SMHRSHTEAT VSTSRSDSTS STQSATAGFI LNEEPITLFR
1681 LELERLQYIL HFPEEVAFQL SSTEYQLFYS IQPMDYVRYV SCDLTSVPVS ENPSPVRNLV
1741 KRLSEVSSWI THVIVSQPTH DDRKVALTAI LRIVETCWNI GNFNAAVEVL MGLKSEKLRP
1801 FWLSLRQEEK SQFDSLCETL LPANQALPSQ AYINAVQRAL RMPQSRVIPF FGIFLRDLYA
1861 IVNDLPNIVV IGQEGETQKL EFMSDPNGED HFSSRIGVGG LLNADKINLV AIVLDNLELF
1921 HRHSRTMIKL LEEQAVPPIQ IPQNEREQKE KEAKTYEPVQ VVRGSSHGVA LIPLDTLTFD
1981 LDVIQRLQHG TTVIHYEPDS GRSNLCLLRL DPSCGQINWH KISYSVNKDP KEKDVLAKVS
2041 VSNLQPLDSG RGAPSPMPSG RTPGTGGVGV EEGELKLSVV KGVELVDSYD IDIEAIYRRH
2101 SMEEMSVPVS CWKVSHGQLL SDNEFIYFLA PQQIAQFWTN GLQSVVKSLQ GQQRYPDRRM
2161 LWIKNVYLSL YEITGESNCG PRPFEALQAF GLSQTNTNAT RPNDSSLSSE PGGAKSRLKN
2221 LKNAMQKKLR GASREGSRSQ SPQPHSPLVR PPSIKSQISS QSGPPGPNSP GYLLKPRGEP
2281 ANSDAGDIDS IYTPRSRTPT SSSYGGRSVG GRSCKSWRSR GGETPNSGSI SSSGQMSIQV
2341 SGLSGPSGKE FQEKPLTLVE FAELFRLFNT RMRKDLRDVF NDVLSTATTP QHCPKRERDR
2401 HSPRMQSRLA SVSNSYNADF LSNDFLTRNT AVTSHHISEK QNKIYNALAL ASVNSMGGLM
2461 DTSRSSMLTP QMLRAFVNTH QMEQIDEQTA IKLIQDHEPD GICRQKNQMS FEGFTRFLCD
2521 PVNFAFVPET IEPDEEDLRY PLSHYYINSS HNTYLTGHQL KGPSSSEMYR QVLLTGCRCV
2581 ELDCWDGDDG LPLIYHGHTL VSKIGFRQVV EIIKKSAFIT SDLPVILSIE NHCSLQQQAK
2641 MAQMFKTVLG DLLVSNFLFE ADFSDSPRLP CPLQMKNKIL IKNKKMIVDP PTPLPMIERG
2701 AVQRGETQLN LHRKQSKNSY ESSTVDEVED DDLDEFLDDE ENEEDDQEEV QVRSEKEDSP
2761 KTSKRAEKSA RNIKQQDSLC SDHSVEQAKP STSKTTSKTN DRKTEDEVLY AQLAQNAIRN
2821 QQPRKNNTGV QIAPELSDIV IYMQATKFKG FPPVDGIQSP RIMEEGPASA SLSFSSRART
2881 PSNLLNTPAP PRRQRSSTQL SQELAAEFLG SVRANATATC YQVTSLNENA AKKLMKRHPA
2941 KCVSYTRDHL IRTYPSAKHY DSSNFNPINC WAHGMQMVAL NFQTPDVIMA VNQAMFEQSG
3001 NCGYQLKPRC LWDESHLLYN KFLPLSKDIA GHSALLLNLT IISGQHVYPN THYASLYVEI
3061 EVIGIHNDCV REKSKVVQRN SVNPIWNHTT QLRIACVDLA FLRIAVCDSG QNGRVVAHRV
3121 VPVKCIRPGF RHLPLRTPTN LPIDNAMIFL RTRFEQEEHI YLHDDDSNTY CNLEHTLAYR
3181 TDLTPNLSPT PILKKQIFVL RITGAFADET AITVHSESGS TVKTVMQQAL LNAGKNADQV
3241 EEYVLIEESL PAPSGEDPIE QRVLPLNEPI MDAVACWNGS MRRFVLRKKG SDPSSRAWIT
3301 SIIKSGTSGS STSVSPSPLT KDGHVKSASS NQLHGRSLDT DAFGEHLEVT EGLNPRARSM
3361 GDTFLVCVHN VSEDQPYAIL RAGIHSTAAD IIRQVFVKAR RSNVDDSEFV LVEETCDDPK
3421 LNQGQMTPKY PNNRTTSRVL GQNENVWKAQ SRWKSMGRFV LENRKDTVHA TLEKVRSFIS
3481 KLEAAKASMD PRHE
//