LOCUS       VDJ66210.1               586 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Casc1_N domain-containing protein protein.
ACCESSION   BX284606-2025
PROTEIN_ID  VDJ66210.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="K09E2.2"
                     /locus_tag="CELE_K09E2.2"
                     /standard_name="K09E2.2b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="InterPro:IPR023247"
                     /db_xref="UniProtKB/TrEMBL:A0A3P6PB36"
                     /db_xref="WormBase:WBGene00019571"
     intron_pos      21:0 (1/12)
     intron_pos      68:0 (2/12)
     intron_pos      143:1 (3/12)
     intron_pos      185:1 (4/12)
     intron_pos      229:2 (5/12)
     intron_pos      255:0 (6/12)
     intron_pos      286:1 (7/12)
     intron_pos      330:1 (8/12)
     intron_pos      387:1 (9/12)
     intron_pos      442:0 (10/12)
     intron_pos      498:0 (11/12)
     intron_pos      539:0 (12/12)
BEGIN
        1 MEGLVETMKQ LKVKFENEQQ WNRYVEGDIL YDVTDEKSAN TVHSYVLDPE NNLSLEDTHK
       61 YFDYIMKALT NSSVDSIDKT DSKWLQLVAQ NMNIFQDVKS KLLKRWTWLV FEQCGIESNK
      121 NEIIFQLESL TLSFWRASSE RKGKIIFFPG IHIEIVPFLQ SIRVVQHFEQ HTTELHNVMK
      181 KYPLEFLYQY VEPEEDPEPY DELVPDIFVE NKLVTKKKLR KKVVKKGLTN TIELALKSGE
      241 KRKKKQAHLS QRTLLSRSPS LKRGEHIRFN LYSDVTPIWK KSATKERSTD GTEHKIDFGT
      301 EAFLGPVYLI SSFESSKKTQ KYGSWTLTID VKLDERKLSG ESLLVSLKVP VEEVFLGSNE
      361 PVVAFRDETS TDWKKGVFTT HTQFDQNTFI VTTRLSKMGY VSLFQHNDFH YPYKSWKILF
      421 EQDKISLRLH TNVVELAFVI EGNYFYLDTL TGDEFSKLRN LHQKKMSLSE LIMKFEKHGV
      481 HIVPNDDIIN KHRDTKKDLD LEIFTYRLIC LNQINCESCR MNSTVSMETV VLTVNGAPRN
      541 ITTKSAGKYV VNFGEAGKKQ RIHENYVTPA TLFQFLMVTR PLIVTK
//