LOCUS VAY52619.1 424 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Band 7 domain-containing protein protein. ACCESSION BX284606-1267 PROTEIN_ID VAY52619.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="mec-2" /locus_tag="CELE_F14D12.4" /standard_name="F14D12.4p" /note="Confirmed by transcript evidence" /db_xref="GOA:A0A3B1DR76" /db_xref="InterPro:IPR001107" /db_xref="InterPro:IPR001972" /db_xref="InterPro:IPR018080" /db_xref="InterPro:IPR036013" /db_xref="UniProtKB/TrEMBL:A0A3B1DR76" /db_xref="WormBase:WBGene00003166" intron_pos 33:1 (1/11) intron_pos 68:0 (2/11) intron_pos 92:1 (3/11) intron_pos 145:0 (4/11) intron_pos 188:0 (5/11) intron_pos 233:0 (6/11) intron_pos 272:2 (7/11) intron_pos 299:2 (8/11) intron_pos 353:1 (9/11) intron_pos 378:0 (10/11) intron_pos 406:2 (11/11) BEGIN 1 MKPRETVATT SGTDSTPKTT ILPAKKDYFH VEANIQNEFG VCGWILTILS YLLIFFTLPI 61 SACMCIKVVQ EYERAVIFRL GRLMPGGAKG PGIFFIVPCI DTYRKVDLRV LSFEVPPQEI 121 LSKDSVTVAV DAVVYFRISN ATISVTNVED AARSTKLLAQ TTLRNILGTK TLAEMLSDRE 181 AISHQMQTTL DEATEPWGVK VERVEVKDVR LPVQLQRAMA AEAEAAREAR AKVIVAEGEQ 241 KASRALKEAA EVIAESPSAL QLRYLQTLNS ISAEKNSTII FPFPIDLLSA FLQRTPPKVE 301 EPPSLPKKIR SCCLYKYPDW VQGMVGSEGG GGHGHSHGGG GGGLGSSQVR AKGSIPSISS 361 RFRPEHHNHQ WPSAAPQHAR SAVSLRSTAD LSSKSVPNIS ESVGPRFTVW STIASKQQTG 421 RCRG //