LOCUS USG68348.1 228 aa PRT BCT 16-JUN-2022 DEFINITION Brevibacillus ruminantium polysaccharide deacetylase family protein protein. ACCESSION CP098755-1009 PROTEIN_ID USG68348.1 SOURCE Brevibacillus ruminantium ORGANISM Brevibacillus ruminantium Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus. REFERENCE 1 (bases 1 to 5627247) AUTHORS Heo,J., Lee,D., Won,M., Han,B.-H., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of Brevibacillus sp. BB3-R1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 5627247) AUTHORS Heo,J., Lee,D., Won,M., Han,B.-H., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (09-JUN-2022) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, South Korea COMMENT Bacteria and source DNA available from KACC. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: MAY-2022 Assembly Method :: Microbial Assembly Application of SMRTLink v. 10.1 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 811.0x Sequencing Technology :: PacBio Sequel; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/10/2022 13:07:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.1 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,522 CDSs (total) :: 5,372 Genes (coding) :: 5,285 CDSs (with protein) :: 5,285 Genes (RNA) :: 150 rRNAs :: 9, 10, 10 (5S, 16S, 23S) complete rRNAs :: 9, 10, 10 (5S, 16S, 23S) tRNAs :: 116 ncRNAs :: 5 Pseudo Genes (total) :: 87 CDSs (without protein) :: 87 Pseudo Genes (ambiguous residues) :: 0 of 87 Pseudo Genes (frameshifted) :: 28 of 87 Pseudo Genes (incomplete) :: 62 of 87 Pseudo Genes (internal stop) :: 15 of 87 Pseudo Genes (multiple problems) :: 18 of 87 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevibacillus ruminantium" /mol_type="genomic DNA" /strain="BB3-R1" /isolation_source="Cow fecal" /culture_collection="KACC:22663" /type_material="type strain of Brevibacillus ruminantium" /db_xref="taxon:2950604" /geo_loc_name="South Korea: Yuseong-gu, Daejeon-si" /collection_date="2022-03-23" /collected_by="Jun Heo, Daseul Lee" /identified_by="Jun Heo" protein /locus_tag="NDK47_05420" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005826604.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTLFACLLFS STTTGATSPP LPAYEPIHRI DTTNKVVALT FDDGPDPKYT PIILEVLHRN 61 KVPATFFVLG SQADKFPTIM QWIKKAGHEI GNHGYHHDDL HKLTEQEIYD EIKLGEKSIL 121 RTTGVLAQYY RPPGGVMTHD VMSAVQSSGY DIIHWSIDPR DWSLSRTASH IAKSVKSNVA 181 PGDIILFHDG GLNQRQTIAA LQELITDLRA QGYRFVTVSQ LLDVQGKK //