LOCUS       USG63797.1               372 aa    PRT              BCT 16-JUN-2022
DEFINITION  Brevibacillus sp. BB3-R1 IS200/IS605 family element RNA-
            guided endonuclease TnpB protein.
ACCESSION   CP098755-3221
PROTEIN_ID  USG63797.1
SOURCE      Brevibacillus sp. BB3-R1
  ORGANISM  Brevibacillus sp. BB3-R1
            Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae;
            Brevibacillus.
REFERENCE   1  (bases 1 to 5627247)
  AUTHORS   Heo,J., Lee,D., Won,M., Han,B.-H., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of Brevibacillus sp. BB3-R1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5627247)
  AUTHORS   Heo,J., Lee,D., Won,M., Han,B.-H., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2022) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            South Korea
COMMENT     Bacteria and source DNA available from KACC.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2022
            Assembly Method        :: Microbial Assembly Application of
                                      SMRTLink v. 10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 811.0x
            Sequencing Technology  :: PacBio Sequel; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/10/2022 13:07:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.1
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,522
            CDSs (total)                      :: 5,372
            Genes (coding)                    :: 5,285
            CDSs (with protein)               :: 5,285
            Genes (RNA)                       :: 150
            rRNAs                             :: 9, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 116
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 28 of 87
            Pseudo Genes (incomplete)         :: 62 of 87
            Pseudo Genes (internal stop)      :: 15 of 87
            Pseudo Genes (multiple problems)  :: 18 of 87
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevibacillus sp. BB3-R1"
                     /mol_type="genomic DNA"
                     /strain="BB3-R1"
                     /isolation_source="Cow fecal"
                     /culture_collection="KACC:22663"
                     /db_xref="taxon:2950604"
                     /country="South Korea: Yuseong-gu, Daejeon-si"
                     /collection_date="2022-03-23"
                     /collected_by="Jun Heo, Daseul Lee"
                     /identified_by="Jun Heo"
     protein         /gene="tnpB"
                     /locus_tag="NDK47_16655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012684339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MEQYKAFQFR LYPTPEQATL INKTIGCCRF VFNHFLDKWN QSYQETGKGL TYRRCSSQLP
       61 ALKTMYGWLK EADSIAIQTT VKNLGDSFAR FFKGQNDRPR FKSKKNLVQS YTTKYTNGNI
      121 ELVGKHVKLP KLGLVKYAKS KEIEGRIMSA TIRRKPSGKY FVSILSKVEI KPLKQVEQTV
      181 GVDLGIKVFA TLSTGEKIAN PKNYRKYEKQ LARWQRILSR RQKGGKNREK ARVKVAGLHE
      241 KLFNTRHDFL HKLSARLIRE NQVICMEDLQ VENMVKNHMM AKSIADASWA AFRTMVEYKA
      301 KWYGRIISIV DKQFPSSQLC SNLSCGYRHK EVKNLNLREW ECPSCGTIHD RDINASRNIE
      361 QEGLRLLGVT LT
//