LOCUS UQS87452.1 6361 aa PRT BCT 19-SEP-2022
DEFINITION Nicoliella spurrieriana hypothetical protein protein.
ACCESSION CP093361-570
PROTEIN_ID UQS87452.1
SOURCE Nicoliella spurrieriana
ORGANISM Nicoliella spurrieriana
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
Nicoliella.
REFERENCE 1 (bases 1 to 1709727)
AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
and Jiranek,V.
TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
sp. nov., Bombilactobacillus folatiphilus sp. nov. and
Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
bacterial isolates from stingless bees Tetragonula carbonaria and
Austroplebeia australis
JOURNAL Int J Syst Evol Microbiol 72 (9) (2022)
PUBMED 36094463
REFERENCE 2 (bases 1 to 1709727)
AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
Jiranek,V.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: NOV-2020
Assembly Method :: Smrtlink v. 9.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 6375x
Sequencing Technology :: PacBio Sequel II
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 03/14/2022 11:59:34
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 1,728
CDSs (total) :: 1,646
Genes (coding) :: 1,628
CDSs (with protein) :: 1,628
Genes (RNA) :: 82
rRNAs :: 5, 5, 5 (5S, 16S, 23S)
complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)
tRNAs :: 64
ncRNAs :: 3
Pseudo Genes (total) :: 18
CDSs (without protein) :: 18
Pseudo Genes (ambiguous residues) :: 0 of 18
Pseudo Genes (frameshifted) :: 8 of 18
Pseudo Genes (incomplete) :: 5 of 18
Pseudo Genes (internal stop) :: 8 of 18
Pseudo Genes (multiple problems) :: 3 of 18
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Nicoliella spurrieriana"
/mol_type="genomic DNA"
/strain="SGEP1_A5"
/isolation_source="Honey"
/host="Tetragonula carbonaria"
/type_material="type strain of Nicolia spurrieriana"
/db_xref="taxon:2925830"
/country="Australia: Brisbane"
/lat_lon="27.4810 S 153.0121 E"
/collection_date="2020-03-26"
protein /locus_tag="MOO44_04670"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/transl_table=11
BEGIN
1 MMGSESNKID AKAQSMQSDG PAAAHQADAV SSLTAKSELL VNSVAKKVVL EYARSAIAAA
61 VDSASQRADQ LAAPARSSAS VALSQFADSA YTNAVNYANP SEAVAGVEAF TANVDHAIDT
121 ANFSSANDVV MHAANSLVNK TTVLGASAAD DTKLTINSAF DQISTELSQQ ADNIAGADSL
181 AQSGVDHLES LTSAAVLSFA KHEMEATYLQ FKDELFQLSD AVAQDAIAEI HSVTDPTYAW
241 VQSNAAAPAS ASAQVSTAIT SMNSIFASYG NVLVSAGVAE YASNAYSAVA YLSGDQLLNA
301 NRMIDSAARV LLNNSIATSN IDAQSINQIY GLIPVASNAI KSITDEVNHS FADRQLSAAT
361 VSAAATTSSL TPAGKVHVDF SINSYVQQAQ SEVAAVVNDP ATLNATLSSA TSTIASMATA
421 AMVADPYASA AHQLQTTVAS ADEQLSRLSG VAQLNATSAV HVATTSASAA LDANHFDAAQ
481 LTETVQTIGE QVDGIIDHYA NSAAVDQLNG AYSAADSMVV QLGTKAERSA ARTQIEAIRD
541 SAAQVIAAQS DVDSVVASAT DTLHSTAVQL IQSDPNRSAH YAVQMVLRSA TDKGAYLDAI
601 SRDNAVSEVA MVATRASSAM VKNAGRASAL ANDVEQASLA ADRIIDHYAV EDARSKTHSM
661 ASSAHQQMQF VSDVAFADQA ASQVAAVQNS MNMTLFHNSD QLAVVSQAVV DAQANLTSIA
721 DYYVQTDAVA AAHAKLASLA STAAVTTADL DEANRGNANR EVAHTLQSAQ AALSATSGHH
781 QVAEQAAASV TATLNHYTLA YTSVAVSSAA SSANQHLAQV GIGDDQTARE IASFVQATDA
841 NIATDRDNFA NVLLDVRNGI AQVNSYVDAA VKKNPHASAV NTVQSTAARL TAERSAANYD
901 FANFSSAVAK TTSVNCKTIS QINDTATIDQ LMSVADTENM HHYQSNVAAS ATAALSAVAK
961 SVRQKLIAVG VTIDDPLDEL MAEYAEIINR DASDARFAAI DQQLGTLELQ SLFDNTIKDH
1021 PQAAKRYELE SMASAASSVA AEYLAESVEL DRDLYRVVSS ATQQVNASAD EAGMASAVAT
1081 ASAAMDAVVN ENVAASALQL IDSAADSANR RVANIKDTGK SIDAQSEIRF NAETGIKLVK
1141 ADAQTPKLVN IDVRNTLMKL TSMTSAAVGD DTVAATLDQI NSMVASARAS VSFADSTADL
1201 RFASQVDQYV DQARSAVAGV EDRNNVAPHL AGLEVQLTTL TDQVKRDSVN AQMIDAKADA
1261 KRSLATLRGQ DQLALNGELD AITDRVADAI DHDLNDPENL KTDIQNGLTA IAQLVADAIQ
1321 KDPYATAHQL VQSAVATTTS TADALSGSVA NNLRSEIASA NSHYADQLPA ADDASVSAVA
1381 SGAVQALTMT TNNYVAAYAA NVINVARERI LNASRAYSGV STNTLERRFS AILGMAMGVI
1441 QSDFNDLNLI HLDIQNIIAQ LEAAFEEAVA ADPNGQYQLA VTKLKQSATA AANVSDQLTA
1501 ANLSSALNSV ASAADGNSLA ASAQMQSVVN AYHADRAVAA VSSAATAAQL RVLRLNDVSK
1561 ISTSAAIDDL VSSANGEISA DADYPRYTSL DAAEGIQAIN ARLASAVAND ATAVTSSVAA
1621 SATSVAFERM GSMTAAASLV ATNQIKRVVD RAVTNQQPTE TLVHQIDQVA DRYLIDSAQA
1681 RLNQTADAVN DQLDTNPDQE PIIKRIQTIT KETMAKVRAD VKMPAYLALD VTDGVAALNE
1741 LVSEYQTDPL VSIKAEINSA AQDLTTMVPA TGSVNSNVSS AAASVARTAI QNIANVADDS
1801 NAVAAFTQSA ADQFDLLRQS YVAESATAVV QSAISSAQVS AAMIADESIA AQYHDQFSGI
1861 ADSFNRQLQA DARNASLTAL DIENAVLEIN QITDQAVASD SQASAATTYS TAVSGALSAA
1921 FRNTALMTTS QVDNYHSAMA KVLPDSEEVL NASQSAVADQ VSAVQTAIAS VANRYYGLWA
1981 VSAVDQAASD LLSGAANYNG SVASWAASQA TNYQSSFNAN LAKDSAATDL IILDAQNAVS
2041 AISATASKAA EQDSTAFANI EINAQISSAN SVLSELTGHT DSTADMQMNS VAHQANASLN
2101 SVSNNLNTVM KIVSSTAVAI DTVANMTIAS SAHSLVASAA DSLMQRAGHL SRGTTQAELI
2161 DLVKQTALTI DDAIDSNASY LVSVSMAAEA GVESMGSAML ADLKQDRSAS AQIAFESLAS
2221 SAADQVGALD SFASANFSSA VGSISNRTTA YLADQLDKPK RVNSEIRYAG KTIQKLMRRA
2281 IAQSATDWVT SQAAGIREQL STIADQPLRD RVDSQIAAQL AKAEVMITSD AFDYQLASLD
2341 ADNHLSAINS LAASAFASDT AAVQSTAHQQ ALDSAYAKVG SLSGTRSVAF DSQIAALDAS
2401 AADYAAQLDA VGNHFIMTSA NAVLDATVAS ANHRLAVIND VNAQAEVLKD IEHRQSQASV
2461 AISADAHHSK FASLDANNAA SAIDLMVNKA VANDSIASAT VMIDQAASSV TAEMQAASID
2521 QLLRFEKQVQ MLTNNAEQAL LGPFTDNDSL VSQAESQLVR LANNYMVSSA YSAVGSLASA
2581 ASDWTSDLAV ADSLNVKAYI DSALNSADSQ ISVHSAAPSL VADAVNNVAN TVEHLASDAV
2641 NNSPMAAAKH SLAHLKSSAA TIDQSLSGLD AQNFSSAINS VAQSAVERFT ENGATINQQA
2701 LQKAAHLMTN LSNLHAAQGA MDQLLRAAEN AEHKIDYLAD NEKRGLAFTD VANTIEKYRD
2761 LIEFDIDHLA LINLDVINGK AKLAAIASAA VKDDVVARAI DRMDRHASSV TSQASGLDSL
2821 ASANLSSAIN DLTARAMTMI QSTDDHPDTL NSLSQSATAK MDSLLGSYVT AAAHEQLANV
2881 RARVDEQAAL IVDVDRASSL STELDALQSS AAAQVSHDAN HAAFIDLDIA NADSAMQRVA
2941 RNAVNGDVSA SAAAQVQGLL ATATSRAQPL VGSAAANFSS AMKSMASRAN RETSGVYDYQ
3001 DLDSILAATS KEVSSTVITY LVDSAHERLS ATVNVASTAV NVIDGQLRAD ANRLIASAAN
3061 SATQMVTTDS HDDQLVSLDA KEASQTILDL ADSAVASQPF ASASSVIAST ATVAMQRVGS
3121 LTSFAAANLS STMNRLNTQA RASLIANGAD SKSAQRVQSS AIMAINEVAN SYVASSASQL
3181 IASATDSASA IIARFDNQDA ASTANDAIDS ALATVANDFA KDRNQPDLMA LDATNAINAI
3241 QSAALFITTT DEVASGNISI SNAAESAYAV ADEWGRTTQF DKQVRDIIAD STGRFASGED
3301 VDIVVSEASD AIANVVSYLI LAVANARLAA LIANVGNNLK RLLNDKQYQA AQLRLLEFNE
3361 VAKHTIQKDV ASSQLIQLDL TNIERDLTRL QAELVAVDGN AVALSAVADH ASAATTNPYV
3421 HGSSDDYLNF VSAVNTVVRD FGAELDQATS AAAINQIDSL TQSYVTSQAT NAIDATVASL
3481 DDQVRDLNNF VIQSSAYRVV HSIASQASVN VQSDYADFSA VSLDADNAIS AATSVMDNAV
3541 TNDSVASGKR AARSIYSSAA SFAVGLSWSD SVEFSMALAS QSAATSYGPN ANNSYLANST
3601 ARFVDQMTAS YVASYANTAL HNAASQALAN LGPVNAQTKT NFTTVLHNVV GDLIDNVASD
3661 NADQELVDLD VQNGITMIDS LADSVVRADP GAAGQYIIAS AANSATSGMA LGAEMDEANF
3721 TSAINSVANQ ASISVNLVKK DLRLVNKAAN SAARKMNHLA TEYRNSLAQS TLYSTFDSAA
3781 LVAESFANPA VQSQAANDVQ SATEHFSSLL DADAANASYV DLDLANGTGE IDRLVASAAS
3841 QDPAVRTHLY LDSIASDAAQ RLVTFADDVQ LNFTSAASRI TNQTVGLVSY ADDPTIVSAA
3901 MSSTATTFYR MANSAVVDSA SATVSTIASD ASRALQLFTD DNVRQQLRAD ILRVESAGLA
3961 NINNDVADDD LLALDIRNVQ RDASAAVSSA IDGDRHAAAI HHVQSVAASL SAANSIHDQV
4021 ERTRMGLQLD SAAQSARADI VNAGSNTDLI NVTVEATAAS MGSIAQTFMV NDAQSQVAAL
4081 TASANSALGW FSGDRRASLA ANVDQLATVM NSQIDRYALD QNARQLMVQR GQASLSAYVD
4141 NVITNDHQAA TSAAIGDLAA STVANVHHLS GTHQANFASE VAMTTSSANA LNRQMVSDAK
4201 TATELQASTA DAFDQVARKY VAESGYAALD AVASSANARF TQYGIDLDQV AEPVQSLLRD
4261 YNSMVDSDAG VEATVALDCH NASLEMNQML AEFTAEDVTT NAKWSVQQGA ASFATSLGVP
4321 SDASVAANYS SAVASVVHSA NVALDEAAVD PDEVNQRVVS AYQALGSLTD QVVADSANAQ
4381 LNSAYSSAAQ LVSAVAADDT INAVFNSYAN LITTDIANRR FASLDADNGA AALHQVVVNT
4441 INQDVQAAFR YRVASDAATI SAASHLNRDD QVRFSSAIAS VASAATVSSV ANISQMNQVA
4501 VVTSQQMQSV ADYYAGQSAV NAVSAAVSSA TVRIAEFSDA AVNAVLQNVT KSVVSAISVD
4561 PQNQLATSLY AHDGVAAAES ITASLIADHP LVSATERVNS MVDLATHDVL MSDSLADMNF
4621 LSAVAKQSLQ ASDAFVTAES DAQALDELTS QTSAAITSIA NSYALASATS ALHRANNSAM
4681 MIANQISDEQ ARSRADQGIV EQVSLASSVI ANDVADKSRL NLDIANATAN LDSVVTEAAA
4741 ADPQTAFNNE VVSAFNAATS KAQSLTGSLA ANYDSAINSA SSAVRFENAS VSSVDPSAVS
4801 SAAKRFQSIT RDYITTSAEQ VVSAHVAEVK ARGHFKDDFM NELNFAFTKA QQTIALDAHD
4861 VELTTLDVHN AIDAIDRLYD SKMAKEPQTA FDHHFASQAA SASEKIGKLD SHSAANFSSA
4921 ANWIANENRK QIATFDNLAP AVKNAAKEMN RLANEYVRGS AANALRGMLD SANAQIELVH
4981 NYVQVERSFD QVASATNSVV ATTSDDPAIV SLHVASANRR IASMATAAVA ADSRASAMTQ
5041 IHQFADSLQS AADFHGAPQQ SFAAVVASVA SQANDQLLEH RSAGATIADV EQRLQAAAGD
5101 LVVQIADQMV TEALDVANTQ AIEIEDIHSR NRTISEIGRL VNSARELIKQ HAHRPFFAYL
5161 DAQNAVEAVA KVTGHAIDAD SIANAILSLN RIADQVVAKL QSLLKATALT HLDNEVHSVA
5221 SAARQAIKAS TADLVAVNVK FASAESQVAS IANSYVAASA NSIVASADQS AATQIEQLSN
5281 ADARNTASRD ILMLVGSAGA AIESDAAHFS YASLDADNAS AAISSVTDKA IANDPRASAN
5341 VMIATQIAST ADMLNGMGLD DQAAFSAAVM PIKASATDRF ERASGDAITI AQAADQSNLE
5401 LTSVAQTFIM TSAKAVVSSA ADSAIALLGE MFADSVAVVY GSVASAVDEA LTRLDGDQSD
5461 FATVSLDAYN AKDDLARIVR ENQNSYAHSA IDSQASHAAS MAGILNARLR SVAINGITRH
5521 ANAAHSTVDL HFGQTAATLS DVAATSATMD SLINEYVIKD PVTSANSVVA SAASSANAKA
5581 ANLNAEYVTE IDTSVASAVS QANSLIAMNP ANSLLDSQLA SDTASSMNSF VNMYQAMAAN
5641 KITTSYAASA YAEIDVMDTK FKLLANSAVA TEVDNVKHVL LDHVDEPDVI FDNVSSAATN
5701 MDSLVAEYGG QNSSAVVDAK QSFATRMSDM ADDVYSQAQV LSINNRGQIN RLNSSVANSA
5761 SVSVSGATTI SGVGSVFTSA SSLVGSVVAI AVGFARETAR AELANAVHDA DKSLGTLEPN
5821 DKRGANSAID TIMAETYGQL TIASDTPTVV DKTKQSIEKI QAAVNAALSN NLMNIKDSYK
5881 AQINSAAQAA YQEETGFNAK ANSFTNETIN QAASAANANI DGTNNLAEIQ RLTNAGINSI
5941 DEANSVAVTN FKTSGSSMLA SAANSATDRT NTLDSDERAA VNSMIGSLVN GANFGLDSAS
6001 NVAEASAAVA SGTAAIGSAV ESTIASVISS AMAMASDLKA ETKRDSIRMQ ISAAAEKART
6061 FATSFESGAA SAVDNYIDQT ASSAAQLIID ADNDDDAEQI ASSGAVNLQM AATYSVADSY
6121 AASMQRSANS VADSLADSAA SFSQATDHAD VTSAITAATN ETKDKINGSR DTKRINSLVN
6181 LLVKNLNKLI GNDNHDQFDI DRIDAKAKID QTAHALLAKL GPMTHGVKQK ITASIQSETE
6241 QLNARIDQST SAEKINRVVE GAKSRFEAQM VTINNAEVKN AKAEAKQVIS SNSQNALVKL
6301 SGIGEVFLET ATETISEVIE RAYRDIDAAE TFDRVTELTN QTSGEINHIV SEAISMNQKM
6361 H
//