LOCUS UQS87085.1 406 aa PRT BCT 19-SEP-2022
DEFINITION Nicoliella spurrieriana glycosyltransferase protein.
ACCESSION CP093361-183
PROTEIN_ID UQS87085.1
SOURCE Nicoliella spurrieriana
ORGANISM Nicoliella spurrieriana
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
Nicoliella.
REFERENCE 1 (bases 1 to 1709727)
AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
and Jiranek,V.
TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
sp. nov., Bombilactobacillus folatiphilus sp. nov. and
Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
bacterial isolates from stingless bees Tetragonula carbonaria and
Austroplebeia australis
JOURNAL Int J Syst Evol Microbiol 72 (9) (2022)
PUBMED 36094463
REFERENCE 2 (bases 1 to 1709727)
AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
Jiranek,V.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: NOV-2020
Assembly Method :: Smrtlink v. 9.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 6375x
Sequencing Technology :: PacBio Sequel II
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 03/14/2022 11:59:34
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 1,728
CDSs (total) :: 1,646
Genes (coding) :: 1,628
CDSs (with protein) :: 1,628
Genes (RNA) :: 82
rRNAs :: 5, 5, 5 (5S, 16S, 23S)
complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)
tRNAs :: 64
ncRNAs :: 3
Pseudo Genes (total) :: 18
CDSs (without protein) :: 18
Pseudo Genes (ambiguous residues) :: 0 of 18
Pseudo Genes (frameshifted) :: 8 of 18
Pseudo Genes (incomplete) :: 5 of 18
Pseudo Genes (internal stop) :: 8 of 18
Pseudo Genes (multiple problems) :: 3 of 18
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Nicoliella spurrieriana"
/mol_type="genomic DNA"
/strain="SGEP1_A5"
/isolation_source="Honey"
/host="Tetragonula carbonaria"
/type_material="type strain of Nicolia spurrieriana"
/db_xref="taxon:2925830"
/country="Australia: Brisbane"
/lat_lon="27.4810 S 153.0121 E"
/collection_date="2020-03-26"
protein /locus_tag="MOO44_02690"
/EC_number="2.4.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003633726.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MWFSQMISDF IFGYPVMVSV VWIVGCIFKE WTLRHEPDNE ADHQPLVSIL VPAHNEHDTL
61 AEAVKSLSNL TYSNYEIVLI DDKSSDDTLE IMHRLKQEYQ SQFNVQIVAI PVNQGKANAM
121 NQGLKVANGE YLLGIDSDSV LDPDSLSYVV KTLNNNPKAG AVAGKPVVRN RTTILGRLQL
181 LEYIGVIDII KRAESFLTGK ITTVSGVIVG FRKAAVESVN GWNTKVMTED IDITWRLYRK
241 NWQVLYNPNI ICWILVPENV RNLIKQRQRW ARGGLEVLSG NRDMLIHGKL SEKFLLSETI
301 VSNAWAVITI LSTITYILTF VLDHNLTLDG NILLFMLLVS FTQFLISFAF SKKSTFMNWS
361 DFLLLPAYIM YYWIINLISC IYAMISFFLD PDHVGTWRSP DRGRKN
//